Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01224 ATGCCTCATTCTTCTTCTTCTTCTCCCGTTTCAACCATTTCCAATCTCCGTATTCGCGCCCTAATACTTTGGTCCTCCAAGAACTACGCAATAGCTGCATTCGTTTTCCTCCTACTCTTCTCCCTCACTCTCTTCTCTCACTTGGATTCCCGTTCCCGTTCGCATTCCCGTTACCCCTCCCATCCACGCTCCACCCTCGTTCCCTTAACGCTCCTCCATAACGCCAACCGAACGCACGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCACTTCCAAAGGGGGTTCGGATCCGGATCTCGCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAACGAAAATTCACCCATTTGGGGTCTTCCAATTATATGGAAAAAAGTATTCCTTTTTCAGGAATATTGAGCTCTGACCCCTCTCAAAACCCAGATTTCTTTAACTGGAACAAGGTGAAGATTCGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCCGAGAGTGAGCAGAGAGGAAGTGAGTTATTGTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCCTGTCCAAAGCAAAGCAGGCGTTGCTCTCAGGATGCTCTGCTGGAGGGTTAGCAGCTCTTATACACTGTGACAACTTCCGGCAATTACTTCCAAAAGAAGCAACTGTTAAGTGCCTTTCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTATAATGAGATCCTTCTATCATGATGTTACCCAGCTGCAGGGTCTTGCAAAAAGTTTGCACAAAGATTGCATTGATAAAATGGAACCATATAAGTGTCTGTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCAGATCCCCTTGGTCACTGGCAAAGCTGCAGACTGAATATTCGCAATTGTAATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTGCTGAAGACTTTGAATGACTTCCAACAACGAAAAGAGATGGGAATGTTTATAAATTCCTGCTTTATCCATTGCCAAACTGAGATGGAAGTAACGTGGCATTCATCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGATCGAGAAGCTGTAAAGCGTATTGATTGCTCTTCTTTTCCCTGCAATCCCACTTGCCACAATATGGATCTCACTTGA 1302 0.4432 MPHSSSSSPVSTISNLRIRALILWSSKNYAIAAFVFLLLFSLTLFSHLDSRSRSHSRYPSHPRSTLVPLTLLHNANRTHALCLDGSAPGYHFQRGFGSGSRNWLLHIEGGGWCNSIASCTQRKFTHLGSSNYMEKSIPFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESEQRGSELLFRGQVIWEAIMDELLSIGLSKAKQALLSGCSAGGLAALIHCDNFRQLLPKEATVKCLSDAGFFLDEKDISGNSIMRSFYHDVTQLQGLAKSLHKDCIDKMEPYKCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGHWQSCRLNIRNCNANMIDKLDGYRGSLLKTLNDFQQRKEMGMFINSCFIHCQTEMEVTWHSSNSPKINDKTIAESVGDWYFDREAVKRIDCSSFPCNPTCHNMDLT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01224 433 Pfam Pectinacetylesterase 64 411 IPR004963 GO:0016787
Vian2g01224 433 SUPERFAMILY alpha/beta-Hydrolases 170 320 IPR029058 -
Vian2g01224 433 PANTHER NOTUM-RELATED 39 430 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01224 Vian-Chr2 25065955 25076682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01224 14 398 Carbohydrate Esterase AT3G09410 57.069 3.89e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01224 K19882 - gmx:100792819 736.873