Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01199 ATGGCTGTAGGCACAAAATCCGGAGGTGAGACTCAGAAGCAAGCGGCACGAGATCTTGAATTTGTTGAGATGGAGTGTGAAGTGAAGTTACAAGGGGGAGATCTGCATCCAGAGGTGGTAACTGAACCAAACCCTGTTGGTTTTGACAACATGGAAGAAGAACACAGTTTGTCGGTTGCCGAGAGAGAGATGTGGCTGAATGGTGACCAAGACGAGATTCTGGGAGTCAACGAGGCTTCTATGTTCTACGCCGATTTCCCTACTCTCCCTGATTTCCCTTGCATGTCGTCATCGTCTTCTTCATCTTCCGCGCCACCGCTTCCTCTGAAGACCATGACGAGTTCCACCACAACCACAGCAACCACCACCACTTCCTCTTCTTCCTCATCCTCTTCATGGGCCGTGTTGAGGTCAGATGTTGAGGAAGATGTAGAGAAAAATCATGGCAACGGCTACATGCATGACCAGTTTGATGCAACAGCTTTGTCTTCCACCGCTTCCATGGAGATTTCCCAACAGCAAAACCCTGATCCTGGACTTGGTGGCTCTGTTGGAGAGTGCATGGAGGATGTTATGGACACTTTTGGGTACATGGAGCTTTTAGAAGCCAATGACTTCTTCGATCCTGCCTCAATCTTTGAGAACGAGGAGAGCGAAAACCCTTTAATAGAATTTGGCACACTGGAGGAACAGGTGTCACTGCAAGAGGGGCAACAGGAAATGATGCATCAGCGAGAGAACATTGAAGACGATCGCAAGGTTCCTGTGTGTGAAGAGATAAAAGGAGAGGAAGAAGGTGGTGAGGGTGGTGGTGGCGTAGTAGATGATGAAATGAGTAATGTCTTCTTGGAGTGGCTCAAGTCTAACAAGGACAGTGTTTCTGCTAATGACTTGAGGAATGTGAAGCTCAAGAAGTCAACAATTGAAAGCGCAGCAAAGCGTTTAGGGGGAGGAAAAGAAGCTATGAAACAGTTGCTGAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAGCGGCGCAAGGAGAATAGTGACAATGTTAACGACCCTCTTCAGGCACAGATTCAGGATCCCAGTGCCCAGAACAACCAGAACACTCACACCAGTGGCTCATTTGCACCTGAATCGAACTCTTGTTTCAACAACCAGACACCCTGGTTGAGTCCTCAAACTTTTGGGACAGATCAGGGCCCTATCATGGTTCCAAATCAGCCCTATTCACAACCCATGGTGGGGTATGTGGGTGACCCTTACACTACTGGTTCTCCTTCCAATAACATCACAGCCACTCATAACCATAACAATAACCCTTACCAACCAGGCACGGACCAATACAACATGATGGAATCAGCACATTCATGGCCTCATTCTCAGTTCAATGTTCCTTCTCCTTATAGCCAGTCTTATGGGGACAACGGTCTTTTCACACCTGGGAGTTTTGGCGGCTATGGCAATAACCAGTATCCTTATCAGTTTTTTCATGGTCCTGGTGATAGGTCGATGAGGTTAGGACCCTCTGCAACTAAGGAAGCAAGGAAGAAGAGAATGGCGAGGCAGAGAAGGTTTTTATCTCATCACAGGAATCACAACGGTAATCACCACCAGAATCAAGGGTCTGACCCACATACAAGACTGGGAAGTGATAATTGCACCACTGGTTTGGTTGCACCTCATCAAGCAAATTCTGCAGCAGCCAATTGGATGTACTGGCAGGCCATGGCGGGTGGCCCGGCTGGTCCTATGGCACCGGTGGTACCGACCGATCCACTGGCCGGACAAACGGTGGTGGACCGGTCCACCATGCACACACAGAATTCTCATCAGAATCGAGCTGCATCAGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGATTCCTTCTGCAAAAGGTGTTGAAGCAAAGCGATGTGGGAAGTTTGGGAAGAATAGTTTTGCCAAAAAAAGAAGCAGAAACTCATTTGCCAGAGCTGGAGGCAAGAGATGGAATATCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGAGCCAATGGCCTCCAAGAAGGAGATTTCATAGTCATATACTCAGATGTGAAGTGTGGAAAATATATGATAAGAGGAGTGAAAGTGAGGCAACAAGGTTTGAAACCAGAAACCAAAAAAGCAGGAAAATCGCAGAAAAACCAGAATGGGACTAATGCATCAAATACAGCTGGAACTGCGGCCAATAATGGCAGGTCATCGCCACCGAAACCAAAAGCTGAAAAAAAGTAG 2283 0.4735 MAVGTKSGGETQKQAARDLEFVEMECEVKLQGGDLHPEVVTEPNPVGFDNMEEEHSLSVAEREMWLNGDQDEILGVNEASMFYADFPTLPDFPCMSSSSSSSSAPPLPLKTMTSSTTTTATTTTSSSSSSSSWAVLRSDVEEDVEKNHGNGYMHDQFDATALSSTASMEISQQQNPDPGLGGSVGECMEDVMDTFGYMELLEANDFFDPASIFENEESENPLIEFGTLEEQVSLQEGQQEMMHQRENIEDDRKVPVCEEIKGEEEGGEGGGGVVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKSTIESAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENSDNVNDPLQAQIQDPSAQNNQNTHTSGSFAPESNSCFNNQTPWLSPQTFGTDQGPIMVPNQPYSQPMVGYVGDPYTTGSPSNNITATHNHNNNPYQPGTDQYNMMESAHSWPHSQFNVPSPYSQSYGDNGLFTPGSFGGYGNNQYPYQFFHGPGDRSMRLGPSATKEARKKRMARQRRFLSHHRNHNGNHHQNQGSDPHTRLGSDNCTTGLVAPHQANSAAANWMYWQAMAGGPAGPMAPVVPTDPLAGQTVVDRSTMHTQNSHQNRAASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGLKPETKKAGKSQKNQNGTNASNTAGTAANNGRSSPPKPKAEKK 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01199 760 SMART B3_2 632 714 IPR003340 GO:0003677
Vian2g01199 760 MobiDBLite consensus disorder prediction 94 138 - -
Vian2g01199 760 Gene3D - 623 718 IPR015300 -
Vian2g01199 760 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 283 727 IPR044800 GO:0003700
Vian2g01199 760 MobiDBLite consensus disorder prediction 94 136 - -
Vian2g01199 760 MobiDBLite consensus disorder prediction 717 760 - -
Vian2g01199 760 MobiDBLite consensus disorder prediction 528 550 - -
Vian2g01199 760 SUPERFAMILY DNA-binding pseudobarrel domain 631 707 IPR015300 -
Vian2g01199 760 MobiDBLite consensus disorder prediction 359 398 - -
Vian2g01199 760 MobiDBLite consensus disorder prediction 727 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01199 Vian-Chr2 24217298 24221374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01199 62 745 B3 DNA Binding Superfamily AT3G24650 45.588 2.81e-146 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01199 K09287 - gmx:100795226 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01199 2 24217298 24221374 Vian2g01199 2 24217298 24221374 ECH