Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01175 ATGGCTTCCTCAATCTTACTCTTTCTTTTCCTACAATTCTTCTCTCTGCACACTTCACATTCTGCATTTTCATCACTCACCACGGACTCATCCCTCTCGGTAGAGAAACCCGACGACGTTATTCTCTCCCCAAACGGCGTTTTCTCCGCCGGCTTCGTTGCCGTCGGTGAAAACGCCTACTCTTTCGCCGTATGCTTCACACAAACCGGTTCCCACAACCACCCCACAATCGTGTGGATGGCGAACCGGGAGAACCCCGTCAACGGAAAACGTTCCAAACTCTCTCTCTCAGGAGCCGGTAACCTTGTCTTGGATGATGCTGCTCAACGAACGGTGTGGTCTTCGAACACTGCTTCGTTGGCTTCACCACTGTTGCATCTCAGAGACGATGGCAATCTCGTGTTGCGTGACCTCCAAGGAACCGTTCTGTGGCAAAGCTTTGATTTTCCCACCGATACTCTTCTTCCGGGACAACCCCTCATCAGACGCACGCAACTCGTGTCTGCAAGAAGCGACACTAACCATTCCTCCGGTTTCTACAAGCTCTTCTTCGACGATGACAACGTTCTTCGTCTTCTCTTCGATGGCCCTGATGTTTCCAGCGTTTACTGGCCATATCCATGGTTGGTGAGTTGGGATGCTGGAAGGTCTACTTACAATAGCAGTAGATCGGCAGTAATGGACTCACTCGGAAGATTCATTTCAACTGATAGTTTTACTTTCATTACATCTGATTATGGTGCTATGAAGCAAAGAAGATTGAAACTTGATTCTGATGGTAACCTTAGAGTGTATACACTGCATGATGGATGGTTTGTTTCGTGGCAAGCGAGAGGTGACCCTTGCAATATCCACGGGATTTGTGGACCTAACAGTGCGTGCAGTAATGATCATGAGCATGGAAGGAAGTGCTCGTGTCTTCCGGGACATAGAATCAAGAACCATAGCGATTGGTCTTATGGCTGTGAACCTGTGTTCGTTTTGTCTTGCAACAGAAGTGAGTCTACCTTCTTGGAGTTGCTGGGTGTTGAGATTTATGGTTATGATGCTAACTTTTCTGAAGGTAATAGTTATAGTCACTGTGAGAATCTGTGCTTAGAAGACTGTAACTGTAAGGGGTTTCAGTACTCATACAATGACGCCAAGAACTATTACAATTGTTACATCAAGATGCAATTGCTTAACGGGCGCCGATCGCCGAGTTTCAGAGGAACAGTATACTTGAAAGTGCCTAAACATCATAGCCTTTTCAGGGAAGAATCGTTTCGTTCAAATGAGCATGTTTGTGTTGTTCAAATTCCCAGGGTGTATGACAAATATCATGTAAAAAAGATTGTGAGGTTTTTTCTTTGGGTGGCCATTGTAATTGGTGCTATTGAATCGGTTTGCGTTTTTGTCGTGTGGGTTTTCATAGTTAAGACGCGCCGAAAGTCTCATGCAGATGAACACGATTACCATCCTCTGACCGATAGATTCAGAAAATATAGTTATTCAGAGTTGAAAAAGGCGACAAAGGGGTTCAGTGAAGAGATCGGAAGGGGTGCGGGAGGGGTTGTGTACAAAGGTATTTTATCAGATGAAAGACATGCAGCAATTAAGAGACTGAATGAAGCTGAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTCAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGATTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCACAAAATCTGTCATCCAACACTCTTGATTGGAGTAAGAGATATAACATTGCCCTTGGAACTGCAAGAGTTCTGGCATATCTTCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAGAACATACTTCTTGATGCTAATTATCAACCCAAGGTAGCAGATTTTGGCCTGTCGAAGCTACAAAACAGGAACAACGTGAACAATTCAAGTTTTTCAATGATAAGAGGAACAAGAGGGTACATGGCACCTGAGTGGGTTCTGAACTTAGCAATCACGTCGAAGGTTGATGTTTACAGCTATGGAATTGTTCTATTGGAGATGATAACTGGGAAGAGCCCAACAACGGGTGTTCAAAACATTGATGGAGAAGAGTCGTACAATGGAAGGGTGGTGGCATGGGTGAGAGAAAAAAAGCGTGGAAGATCTTGGCTAGAGCATATCATTGATCCTGCAATCCAAACAAACTATGATGAATCTAAGATGGAGGTTTTAGTCAAAGTGGCTTTGGACTGTGTTGAGGAAGACAAAGATATAAGGCCAACCATGAGCCAAGTCGTGGAAATGCTTCAAAGTGTTCCTCAGTAG 2352 0.4426 MASSILLFLFLQFFSLHTSHSAFSSLTTDSSLSVEKPDDVILSPNGVFSAGFVAVGENAYSFAVCFTQTGSHNHPTIVWMANRENPVNGKRSKLSLSGAGNLVLDDAAQRTVWSSNTASLASPLLHLRDDGNLVLRDLQGTVLWQSFDFPTDTLLPGQPLIRRTQLVSARSDTNHSSGFYKLFFDDDNVLRLLFDGPDVSSVYWPYPWLVSWDAGRSTYNSSRSAVMDSLGRFISTDSFTFITSDYGAMKQRRLKLDSDGNLRVYTLHDGWFVSWQARGDPCNIHGICGPNSACSNDHEHGRKCSCLPGHRIKNHSDWSYGCEPVFVLSCNRSESTFLELLGVEIYGYDANFSEGNSYSHCENLCLEDCNCKGFQYSYNDAKNYYNCYIKMQLLNGRRSPSFRGTVYLKVPKHHSLFREESFRSNEHVCVVQIPRVYDKYHVKKIVRFFLWVAIVIGAIESVCVFVVWVFIVKTRRKSHADEHDYHPLTDRFRKYSYSELKKATKGFSEEIGRGAGGVVYKGILSDERHAAIKRLNEAEQGEGEFLAEVSIIGRLNHMNLIQMWGYCAEGKHRLLVYEYMENGSLAQNLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLQNRNNVNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLEMITGKSPTTGVQNIDGEESYNGRVVAWVREKKRGRSWLEHIIDPAIQTNYDESKMEVLVKVALDCVEEDKDIRPTMSQVVEMLQSVPQ 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01175 783 Gene3D Transferase(Phosphotransferase) domain 1 580 783 - -
Vian2g01175 783 ProSiteProfiles EGF-like domain profile. 278 316 IPR000742 -
Vian2g01175 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 207 IPR036426 -
Vian2g01175 783 SUPERFAMILY Protein kinase-like (PK-like) 483 778 IPR011009 -
Vian2g01175 783 FunFam S-receptor-like serine/threonine-protein kinase 474 579 - -
Vian2g01175 783 Pfam S-locus glycoprotein domain 238 313 IPR000858 GO:0048544
Vian2g01175 783 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Vian2g01175 783 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Vian2g01175 783 CDD STKc_IRAK 511 779 - -
Vian2g01175 783 Gene3D Phosphorylase Kinase; domain 1 469 579 - -
Vian2g01175 783 Pfam Protein kinase domain 508 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g01175 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vian2g01175 783 FunFam Serine/threonine-protein kinase 580 783 - -
Vian2g01175 783 ProSiteProfiles Protein kinase domain profile. 505 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g01175 783 CDD PAN_AP_plant 326 411 - -
Vian2g01175 783 Gene3D - 149 273 IPR036426 -
Vian2g01175 783 Pfam D-mannose binding lectin 76 163 IPR001480 -
Vian2g01175 783 PANTHER OS07G0415500 PROTEIN 3 780 - -
Vian2g01175 783 ProSiteProfiles PAN/Apple domain profile. 330 411 IPR003609 -
Vian2g01175 783 Gene3D - 19 148 IPR036426 -
Vian2g01175 783 CDD B_lectin 41 150 IPR001480 -
Vian2g01175 783 SMART serkin_6 505 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g01175 783 SMART blect_4 32 150 IPR001480 -
Vian2g01175 783 Pfam PAN-like domain 330 392 IPR003609 -
Vian2g01175 783 PIRSF SRK 1 783 IPR024171 GO:0004674
Vian2g01175 783 Gene3D Hepatocyte Growth Factor 339 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01175 Vian-Chr2 23463508 23465859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01175 434 778 Receptor kinase-like Gene Family AT1G56120 38.873 1.77e-65 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vian2g01175 Pkinase 2.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01175 - - gmx:100784287 1125.15