Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01145 ATGAACGAAATAGTCGTGATTTCCAAGCTTCAACATCGCAATCTTGTAAAACTTTTTGGCTGCTGTGTAGAAGGTGATGAGAAGATGTTGATATATGAATACATGCCAAACAAAAGTTTGGATGTATTTATCTTTGATCCATCAAAGTGTAAACTCCTAGATTGGAGGAAGCGCAGTAGCATAATAGAAGGAATAGCTCGAGGACTACTTTATCTACACAGAGACTCCAGACTAAAAATAATACACAGAGATTTGAAGGCCAGTAATATATTGCTAGATGAAGAACTAAATCCAAAAATATCAGATTTTGGTATGGCTAGAATCTTTGGTGGAACTCAAGATCAAGTTAATACTAGTAGGGTTGTTGGAACCTATGGCTACATGTCTCCTGAATATGCAATGGAAGGACTATTTTCAGAAAAATCAGATGTGTTTAGCTTTGGTGTTCTGGTACTAGAGATTGTTAGTGGAAGAAGAAGCTCAGGTTTTTATGGCAATGTGCATGCTCTTAGCCTTTTAGAATTTGCTTGGACACAATGGAAGGAAGAAAATGCATTATCTCTAATAGATCCAGAACTATATGATCCTATTCATCATAAAGATATCCTAAGGTGCATACACATAGCTCTTTTATGTGTACAAGAACTTTCTGTAGACAGACCCACTATGGCTACAGTAATTTCTATGCTCAGCAATGAGTTTGTGCTTCCTACTCCAAGTCAATCTGCATTCATTCGGCGACAAAAAATGTTGAATTTGACTTCATCGGAAGAAACTCAGAGATTTCGCTCCATCAATGTTGTTAGTGTTACAGAAATTCAAGGTAGATAG 831 0.367 MNEIVVISKLQHRNLVKLFGCCVEGDEKMLIYEYMPNKSLDVFIFDPSKCKLLDWRKRSSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGTQDQVNTSRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLVLEIVSGRRSSGFYGNVHALSLLEFAWTQWKEENALSLIDPELYDPIHHKDILRCIHIALLCVQELSVDRPTMATVISMLSNEFVLPTPSQSAFIRRQKMLNLTSSEETQRFRSINVVSVTEIQGR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01145 276 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 252 - -
Vian2g01145 276 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Vian2g01145 276 Gene3D Transferase(Phosphotransferase) domain 1 35 238 - -
Vian2g01145 276 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 238 - -
Vian2g01145 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Vian2g01145 276 Pfam Protein tyrosine and serine/threonine kinase 1 230 IPR001245 GO:0004672|GO:0006468
Vian2g01145 276 SMART serkin_6 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g01145 276 SUPERFAMILY Protein kinase-like (PK-like) 1 249 IPR011009 -
Vian2g01145 276 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01145 Vian-Chr2 22571020 22572144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01145 2 244 Receptor kinase-like Gene Family AT4G23230 59.426 4.75e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian2g01145 PK_Tyr_Ser-Thr 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01145 - - gmx:100779455 459.914