Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01125 ATGACAAGGCTGACTGCTAAAGTCCGAAAGGTCAGAAACGAGCTTGAACAATTGATGCATGATGATGATATGGTGGATGATGATGATGATATGGCTAACCTATACCTGTCAAGAAAAGGGGGTTCATCATCACCAGTTAGTGGATCAAGTGCTGCAAATTGGTTTGCTGCCTCCCCCACCATTGGATCAAAGATATATAGAGCCAATAGAGCAAGTCCAGCAACAGTTCGTTTAGATGAAAATGATGTGAAAGAGCTGGAAATGTTACTAGAGAATGATGGCTTGATACCTGCTAGATCTTCTAGTGGTCCTTCAGGAAAAGATTTGCCATTTTTTGGCTTGGTTTTTGCACGAGAGGGGATTTCCAAATCGGGAGGTACTTTTCTTGCTCAGAACTCTAAGACTAGTAACACCACCCCAAAATTGGAGGGTCATCTAGAAGAGCATCCATCACTTCAAACAAACCTAACAACTCTTCTTCCATTAACATTTATTCACCATGTACACAAGCAAACAAAAGGAACACAACAAGGAGAAGAGACGGAGAGGCCATTTGAAACTATATGTGATGTAAGGGGCACTACAAGTGTTCATAACAAAGGGGAAGAATGTAAAGGGGATTCTAGGGATCTCATTTTTTATGTGTCAGCAACCAAGACTACAAAGAAAAAGCCAATACTTGTTGTCTCCCTTAGGCCTACTAGAAACCCATACGATACCAGTAAGATTGCAGGGGGTTCTTCTAGTGGATCTGCTTCTCTGGTGTCTGCTGGACTGTGTCCTGTTGCCCTTGGTGTTGATGGGGGAGGATCTGTAAGGATGCCAGCATCTCTTTGCGGTGTTGTTGCAATGAAGTCAGAATATGCTGCTCCAAAACTTTGCTCAAGCTTCAGGATCATTACAATTGGAAGGTACTGA 918 0.427 MTRLTAKVRKVRNELEQLMHDDDMVDDDDDMANLYLSRKGGSSSPVSGSSAANWFAASPTIGSKIYRANRASPATVRLDENDVKELEMLLENDGLIPARSSSGPSGKDLPFFGLVFAREGISKSGGTFLAQNSKTSNTTPKLEGHLEEHPSLQTNLTTLLPLTFIHHVHKQTKGTQQGEETERPFETICDVRGTTSVHNKGEECKGDSRDLIFYVSATKTTKKKPILVVSLRPTRNPYDTSKIAGGSSSGSASLVSAGLCPVALGVDGGGSVRMPASLCGVVAMKSEYAAPKLCSSFRIITIGRY 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01125 305 Gene3D Magnesium transport protein CorA, transmembrane region 1 93 - -
Vian2g01125 305 ProSitePatterns Amidases signature. 245 276 IPR020556 -
Vian2g01125 305 Coils Coil 1 21 - -
Vian2g01125 305 Pfam Amidase 232 288 IPR023631 -
Vian2g01125 305 SUPERFAMILY Amidase signature (AS) enzymes 230 286 IPR036928 -
Vian2g01125 305 Gene3D Amidase signature (AS) domain 221 302 IPR036928 -
Vian2g01125 305 PANTHER TRANSAMIDASE 233 299 IPR000120 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01125 Vian-Chr2 22012856 22022888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01125 1 91 MRS2 Gene Family AT5G09720 55.208 1.37e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01125 K16075 - var:108327398 157.532