Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01088 ATGGAAAACCAGTTCTTCCTCAATGCTCCTCAGCTGCATTTTGACCCTTCACCACCTCCTTGTCCACCTTCTTGGCACTCACTCTCTTCTCCCATGGATGTTCAAGTTTTGAATTGCTCAGCTGAGAGGACACAGGATTGCTTTTACACTCCGGCATGGGACAAGTCAACGGATCATGCTGTTCAGTTTGATTCTGCACTCAGTTCAATGGTGTCTTCTCCTGCAGCTTCCAATTCCAACATGTCCAGTGAGAATTTTGTCATCAGGGAGTTGATTGGGAAATTGGGAAACATTGGTGGTGCCTCTGATGAGATCTCACCTCATTCTCAGCCTTTGGTTCCTGCATCTTCCTACATCAATGGCAATAACAGCACCAACACTTCATGTTACAGCACCCCTTTGAGTTCTCCTCCCAAGCTGAGCTTGAACAAGATCCCCACAATGATGAATCACTTGGTGAAAGAGGGCATGCCCCCCAGTTTGAATTCCAGTGTGGCAGAATTCTCAACTGATCCTGGTTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGGACCACCCAATTGGGCCCCAGCAATGCTGAGTTGACTCACAGATCTTCTCCATTGGTGGAAAATGGGAAGCTCCCCAGAGTCTCAAGTAGTCCATCTCTCAAAGTGCTTGGATCTCAAATGAGTGCCCAGGAGAACAAGAATTCTCCATTGCAAGACCAAATGGAAGTGGCCAATTCTCAAGAGGAATCAACAATCTCGGAACAAATTCCAAATGGGGACAATGGGGTGAAACCTTCTCCATATGCGAATTCTAGAAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACTTCAACCCCCACCAACCCCCCTATGGCTGCTGAAGCCAGTGAAGATTCAAATGCAAAGCGCAGCAAGCCTAACGAAGGTGAGGGCAATGAAAATGGCCAAGTGAAGGCAGAGGAAGAGTCCAAAGGGGTAACTAGTAATACAAATGATGACAAACAGAACAAGAGTAACTCAAAACCTCCAGAGCCCCCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCCACTGACAGTCACAGTCTTGCAGAAAGAGTGACAGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTCCAGTCATTGCAGCGCCAAGTTGAGATATTTCAATCAAATAATTCTTTGGCACAGCCAATATTCCCACTAGATTCCTCAGCAACAGCCTTTTATGGGCAACACCCTCAACAAAACCCAGCAACCCACAGTAACATTCCTAATGGAACTGTGTCCCACACCTCAGTGGACCCATTGGATACTGGTTTGTGCCAAAGCATTGGCATGCAGTTATCTCACCTAAATGCCTTTAATGAAGGTGCCTCTCAGTATCCAATAGCATTCTCTGAAGGTGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGCAAATAGGAAAACACCAGTACAATCTCAGAGTTTCAATGGTAACTGA 1527 0.4558 MENQFFLNAPQLHFDPSPPPCPPSWHSLSSPMDVQVLNCSAERTQDCFYTPAWDKSTDHAVQFDSALSSMVSSPAASNSNMSSENFVIRELIGKLGNIGGASDEISPHSQPLVPASSYINGNNSTNTSCYSTPLSSPPKLSLNKIPTMMNHLVKEGMPPSLNSSVAEFSTDPGFAERAAKFSCFGSRSFNGRTTQLGPSNAELTHRSSPLVENGKLPRVSSSPSLKVLGSQMSAQENKNSPLQDQMEVANSQEESTISEQIPNGDNGVKPSPYANSRKRKGPSKGKAKETSTPTNPPMAAEASEDSNAKRSKPNEGEGNENGQVKAEEESKGVTSNTNDDKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVTGKALMLDEIINYVQSLQRQVEIFQSNNSLAQPIFPLDSSATAFYGQHPQQNPATHSNIPNGTVSHTSVDPLDTGLCQSIGMQLSHLNAFNEGASQYPIAFSEGDLHTIVQMGFGQTANRKTPVQSQSFNGN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01088 508 MobiDBLite consensus disorder prediction 305 335 - -
Vian2g01088 508 MobiDBLite consensus disorder prediction 214 265 - -
Vian2g01088 508 MobiDBLite consensus disorder prediction 189 207 - -
Vian2g01088 508 MobiDBLite consensus disorder prediction 287 301 - -
Vian2g01088 508 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 245 434 IPR024097 GO:0006355
Vian2g01088 508 MobiDBLite consensus disorder prediction 189 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01088 Vian-Chr2 21051742 21053987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01088 1 479 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 37.500 2.66e-69 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01088 - - gmx:100812081 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01088 2 21051742 21053987 Vian9g01298 9 27792652 27795347 PCT