Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01031 ATGCCGTCAACTGCGGCAGCACCTCCCGCTACCGCTATCGCCAACACCTCCCGCTACCGCTATCGGCAGCGTGGTGGTGGCGAAAGAAACGTTGGTGACTTTAGCTTGGTGGCTAGCCATGTAGAGAAGGAGGAGAGGTCAGAGAAGAGGTCGGAGAAGTTGTCGGATCTACTGAACGCGGCAGAGACGAAAACAGATGCGGAGGCGGAGAGGAAAGAGGAGGCATTGGCGGAGCTGAAGCGAGTGGTGAAGGAGTTGCGCGAAGAAGACCTCTCGATGCGGAGAATCGCGGCAGAGAGAGTGAGGTTGCTAGCGAAGGAAGATGTCGAAGCAAGAACGAATCTCGCAATGCTTGAAGTAATTCCTCCTCTCGTCGAAATGCTCGATTCGGAAGACGCTCATTCACAAATCGCTTCACTCTATGCTTTGCTCAATCTCGGAATCAGTAATGATGCGGATTCAAATTCGTCGGTGGCCGAAGCGATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCAAATAAACCCATAGTTGGTTTCTCTGGTGCAATACCATTCCTTGTTAGCACCCTAAAAAGTTTAGAGGCTAGTAAAACTGTATCACAATCCCAATGGCAAGTGAAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCAATATGA 666 0.5 MPSTAAAPPATAIANTSRYRYRQRGGGERNVGDFSLVASHVEKEERSEKRSEKLSDLLNAAETKTDAEAERKEEALAELKRVVKELREEDLSMRRIAAERVRLLAKEDVEARTNLAMLEVIPPLVEMLDSEDAHSQIASLYALLNLGISNDADSNSSVAEAIVANFLGLSALDSNKPIVGFSGAIPFLVSTLKSLEASKTVSQSQWQVKQDALRALYNLSI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01031 221 Gene3D - 69 221 IPR011989 -
Vian2g01031 221 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 38 152 - -
Vian2g01031 221 Coils Coil 44 89 - -
Vian2g01031 221 SMART arm_5 172 221 IPR000225 GO:0005515
Vian2g01031 221 SMART arm_5 108 148 IPR000225 GO:0005515
Vian2g01031 221 SUPERFAMILY ARM repeat 78 220 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01031 Vian-Chr2 19117028 19117848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01031 70 220 U-box Gene Family AT1G67530 30.814 1.55e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01031 - - vum:124827669 308.531