Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00996 ATGGAGGGGAGAGATGAGGACGTGAGGGTAGGAGCCAACAGGTATGGTGAGAGACAACCAATAGGAACAGGTGCACAGACACAAGATGGCAAAGACTACAGAGAGACTCCTCCAGCTCCATTGTTTGAGCCTAGAGAGTTAACATCATGGTCTTTCTATAGAGCAGGGATAGCAGAATTTGTGGCCACATTCTTGTTTCTTTATGTCACTGTTTTGACTGTGATGGGGGGTCACATTAACCCAGCTGTGACATTTGGGTTGTTCTTGGCTCGCAAGTTATCTCTCACTAGGACAGTATTCTACATTATAATGCAGTGCTTAGGAGCTATCTGCGGTGCTGCTGTGGTCAAGGGATTCCAATCAAATCAATATGAGAGGCTTGGTGGTGGTGCCAACACTCTGGGTAAAGGATACTCCAAAGGTGATGGTCTTGGAGCAGAAATTGTAGGCACGTTTATTCTGGTTTACACTGTTTTCTCAGCCACAGATGCAAAACGAAATGTTAGAGACTCGCATGTTCCTATTTTAGCACCTTTGCCTATTGGTTTTGCCGTCTTTCTGGTGCACTTGGCTACAATTCCTATCACAGGGACTGGCATCAACCCTGCTAGAAGTTTAGGTGCAGCTCTTATATACAACAAGGACCAAGCTTGGGATAACCACGTGAGATAG 672 0.4568 MEGRDEDVRVGANRYGERQPIGTGAQTQDGKDYRETPPAPLFEPRELTSWSFYRAGIAEFVATFLFLYVTVLTVMGGHINPAVTFGLFLARKLSLTRTVFYIIMQCLGAICGAAVVKGFQSNQYERLGGGANTLGKGYSKGDGLGAEIVGTFILVYTVFSATDAKRNVRDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDNHVR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00996 223 Gene3D Glycerol uptake facilitator protein. 39 222 IPR023271 -
Vian2g00996 223 SUPERFAMILY Aquaporin-like 45 216 IPR023271 -
Vian2g00996 223 Pfam Major intrinsic protein 72 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g00996 223 MobiDBLite consensus disorder prediction 1 33 - -
Vian2g00996 223 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g00996 223 PRINTS Major intrinsic protein family signature 60 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g00996 223 PRINTS Major intrinsic protein family signature 182 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g00996 223 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g00996 223 CDD MIP 54 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian2g00996 223 ProSitePatterns MIP family signature. 78 86 IPR022357 -
Vian2g00996 223 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 76 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00996 Vian-Chr2 17287738 17288729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00996 1 222 Major Intrinsic Protein MIP AT2G45960 71.705 3.85e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00996 K09872 - gmx:100809467 418.313