Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00955 ATGGGTTCCTCTCGCTCACGTGCCTCTGCCACCGCCAAAGAACGCCTACGCTGGACACAAGAACTCCATGATCGCTTTGTAGTGGCTGTAAATAGACTAGGTGGCCCTGATCGGGCAACACCAAAAGGTATATTGAAAGGAATGAAGACTATGGGTATTTCAGAGCTAAGCATTTATCATGTCAAAAGCCACTTGCAGGATCTCCAAATTGATTCCAGAGTCCTCCACAATGCTCTTCAACTAAAGGAACTGCTTCAAATGCAGAAAGAGGTGCAAAATCGCTTGGGTGATAAAACACAGGTTGCGAGAAGTATGAAGGAAAAAGTTGAAGCACAAGGAAGGTACATGGAGAGACTTGGACAAAGCAGTGAGATGAAAACAAGAACTGGAAAAGCATGCAAGGCTTTTGATTCTTCTACAACTGCACCTCTGCCTTCTCTTTCTGAGGAATCCGAATCACTGAAATCACAGAGTGAGAAAGAGCATGAATCAGTCAAAAAGCAAAGGATTTCAGAAGAGGGTGTTTTTCCATTAAGTTTTGAACATGCATCATCAACCCCACCAGAATTCTACAACCAAACATGGAATCTTCCTTGGAGCCAGCTTGCAGCAGCATGCCTATCAACTTTGGATCCCAGTTTCATATTTTGA 651 0.4363 MGSSRSRASATAKERLRWTQELHDRFVVAVNRLGGPDRATPKGILKGMKTMGISELSIYHVKSHLQDLQIDSRVLHNALQLKELLQMQKEVQNRLGDKTQVARSMKEKVEAQGRYMERLGQSSEMKTRTGKACKAFDSSTTAPLPSLSEESESLKSQSEKEHESVKKQRISEEGVFPLSFEHASSTPPEFYNQTWNLPWSQLAAACLSTLDPSFIF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00955 216 MobiDBLite consensus disorder prediction 122 152 - -
Vian2g00955 216 Gene3D - 12 71 - -
Vian2g00955 216 SUPERFAMILY Homeodomain-like 12 67 IPR009057 -
Vian2g00955 216 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 67 IPR006447 GO:0003677
Vian2g00955 216 Pfam Myb-like DNA-binding domain 16 68 IPR001005 -
Vian2g00955 216 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 162 IPR044848 GO:0003700
Vian2g00955 216 MobiDBLite consensus disorder prediction 96 169 - -
Vian2g00955 216 MobiDBLite consensus disorder prediction 153 169 - -
Vian2g00955 216 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00955 Vian-Chr2 16115131 16117912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00955 13 150 G2-like Transcription Factor Family AT3G24120 37.853 5.92e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian2g00955 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00955 - - aip:107639556 207.223