Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00952 ATGAGGCAGCAATTCCCGTTTTACAATGAGCTTCAAGGGATTTTCGCATCAAGGATGCAGAGAATGTTGTGGGCAGAAGCAGAAGGAGGGTCGAAGAAGAAGGTGGTGCAGCTTTCATCGGAGGATGAGGAAGAGGGAAACGAAGAGAGTGAGGGAGATCAGAAGGGTAGCGTGATGAAAAAGAAGAAGAAGGGGAAGATGGTAATAGGAGGAGGGAGTGGTAGCAGTAGAAATATGGAGAGTTTGAAGGAGATCATGGAGGAGTTCATGAGGCAACAGATGCAGATGGAGGCACAGTGGATGGAGGCGTTTGAGGCAAGGGAGAACGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATGATGATGGATCAGAGATGGAGAGAGAGGGAAGACCAAAGAAGGATTAGGGAAGAACTTAGGGCTGACAAGAGAGATGCTCTAATCACAGCACTTCTCAACAAGCTCACAAGAGAACAGATGTAG 513 0.4834 MRQQFPFYNELQGIFASRMQRMLWAEAEGGSKKKVVQLSSEDEEEGNEESEGDQKGSVMKKKKKGKMVIGGGSGSSRNMESLKEIMEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMDQRWREREDQRRIREELRADKRDALITALLNKLTREQM 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00952 170 Coils Coil 79 99 - -
Vian2g00952 170 PANTHER FI21293P1 4 166 - -
Vian2g00952 170 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00952 Vian-Chr2 15921669 15922181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00952 1 169 Trihelix Transcription Factor Family AT5G01380 43.814 8.41e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00952 - - gmx:100778195 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00952 2 15921669 15922181 Vian2g00952 2 15921669 15922181 ECH