Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00914 ATGGATTCACTTGCAATCAAATTGCCAAAATCTCTCAGCATTATTGGTTTATTATCTCTTATGGCTTCTCAAGCTCTTGTTCTTGTCTTCCTCTTATTTCCCTTTTCCTTACACCAAGTTGTTGCCTCCTCCTCCAATGGTTTGATCTTTGAAGGATTTGATGAAAACAGCGATATAAGCCTTGAAGGATCTTCCATCATCAAAACCAGTCGTTTACTTAAACTCACTAACAGATCAACCAATATTATAGGCCATGCATTCTACAAAACACCCTTCCAAATGCTCAACAAAACAGACCCTCCCCTTGAACCCTCTGCTTTTTCTTTCAGCACCTACTTTGTGTTCTCAATTGTATCCCCTAGTTCTGGTTCTGGGGGCTTTGGCCTTGCCTTCACCATAGCACCATCAACACAGTTTCCTGGGGCTGCGGCTGGCCATTATCTTGGTCTTTTTAACTCCACCAATGATGGGAATGACACAAATAACATCTTTGCGGTGGAGTTTGACACTGTAAATGGTTACAAAGGTGACTCGGACACTGAAGGAAACCATGTTGGGGTGAATATAAATGGAATGGACTCAAAGATTACTGAACCAGCTGCATACATTAAAGAGGGTACTGAGAGTGTAAAGGAGGATTTCAGAATGGCCAAGGTTGATGCTGTCCACGCTTGGATAGAGTATGATGGTGAAAAGAGAACTCTGGATGTAACAATAGCTCCTTGGGAATTATCAAGGCCCAGCACACCACTCATAAAGAATTACAACGTTGACCTTTCCAACGTTATGAAGGAAAACATGTATGTTGGTTTCTCAGCATCAACTGGCCAGGAAACAAGCTCTCATTATCTTCTAGGGTGGAGTTTTGCAGTGAACGGTGTTGCTATGAATTTGTCTAATCTTCCAGAGCCACCACCCAAGGAGGAAGATCCCTCTTCGTTTCCTTGGGTCAATGTTGTAATTGGCATCTTGTCCGCTTTGACTTTGAGCCTTCTGTGTCTTCTAATTCTTCTGACATGTTATAAGAGATACATGGATTTTGAGGTTCTTGAGGACTGGGAGATGGATTGTCCTCACAGGTTCAGATACAAAGATCTTCACCTTGCCACAGAAGGGTTCAAAGAGAGCCAACTAATTGGAATTGGAGGCTTTGGTGCTGTGTACAAAGGTGTCTTACCAACTTCAGGAACTGAAGTTGCTGTTAAGAGGATTGTGAGGAGCCCTTTCCATGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTGAGACACAAGAATTTGGTGAACCTTCAAGGATGGTGCAAGAAAAAGAATGATCTCCTTCTCGTCTATGATTTCATTTCAAATGGAAGCCTTGATTGTGTCCTATATAACCCCAACAACAGCTTTGTCTTGAACTGGGGGCAAAGATTCAACATTCTCAAAGGCATCAGTGCTGGACTATTGTACTTGCATGAAGAGTGGGAGCAAGTGGTGATCCATAGAGACGTGAAAACTAGCAATATTTTGATAGATGGAAACTTGAATGCACGTTTAGGTGACTTTGGACTTGCAAGGCTCTATAACCATGGTCAAGTATCACACACAACCAGGGTGGTTGGAACCATTGGCTACATTGCACCAGAGTTAACTCGCACAGGAAAAGCTTCTACAAGAACTGATGTTTATGCATTTGGGGTTGTGCTTCTTGAAGTGGTCACAGGTAAGAGGCCTCTTGATTCAGATCAGTTTTTCTTGGTCGAATGGGCGATTGAGAATTACCATTTGGGTCAAATTCTTGAGGTGGTTGATCCTAAGCTGAATTCAGTTTATGATGAGGAAGAAGTTGAGTTGGTTCTCAAGTTGGGTTTACTATGCACTCAACGTAGATCAGATTATAGACCTACCATGAAACAAGTTACAAGGTACCTAAACTTTGATGACCCTCTTCCTGATATTGGTGATTTGGGATATGGTGGTTCTAATAGCAGCAGCAGAATGAACTCAGGTTTCTTAGAAGTCACGCCATCTTTGAGAACTGTTGAAACATCTGGGTATCTGTCCTCCATTACCATGAGTACCAAGTCCTTGGATGCTGGTAGATAG 2094 0.4241 MDSLAIKLPKSLSIIGLLSLMASQALVLVFLLFPFSLHQVVASSSNGLIFEGFDENSDISLEGSSIIKTSRLLKLTNRSTNIIGHAFYKTPFQMLNKTDPPLEPSAFSFSTYFVFSIVSPSSGSGGFGLAFTIAPSTQFPGAAAGHYLGLFNSTNDGNDTNNIFAVEFDTVNGYKGDSDTEGNHVGVNINGMDSKITEPAAYIKEGTESVKEDFRMAKVDAVHAWIEYDGEKRTLDVTIAPWELSRPSTPLIKNYNVDLSNVMKENMYVGFSASTGQETSSHYLLGWSFAVNGVAMNLSNLPEPPPKEEDPSSFPWVNVVIGILSALTLSLLCLLILLTCYKRYMDFEVLEDWEMDCPHRFRYKDLHLATEGFKESQLIGIGGFGAVYKGVLPTSGTEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDFISNGSLDCVLYNPNNSFVLNWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDGNLNARLGDFGLARLYNHGQVSHTTRVVGTIGYIAPELTRTGKASTRTDVYAFGVVLLEVVTGKRPLDSDQFFLVEWAIENYHLGQILEVVDPKLNSVYDEEEVELVLKLGLLCTQRRSDYRPTMKQVTRYLNFDDPLPDIGDLGYGGSNSSSRMNSGFLEVTPSLRTVETSGYLSSITMSTKSLDAGR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00914 697 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Vian2g00914 697 Gene3D Phosphorylase Kinase; domain 1 358 449 - -
Vian2g00914 697 FunFam L-type lectin-domain containing receptor kinase V.9 44 297 - -
Vian2g00914 697 FunFam L-type lectin-domain containing receptor kinase S.4 450 651 - -
Vian2g00914 697 Pfam Legume lectin domain 49 299 IPR001220 GO:0030246
Vian2g00914 697 SMART serkin_6 373 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00914 697 CDD lectin_legume_LecRK_Arcelin_ConA 49 293 IPR001220 GO:0030246
Vian2g00914 697 PANTHER - 39 642 - -
Vian2g00914 697 FunFam Lectin-domain containing receptor kinase VI.3 358 449 - -
Vian2g00914 697 SUPERFAMILY Protein kinase-like (PK-like) 356 642 IPR011009 -
Vian2g00914 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 302 IPR013320 -
Vian2g00914 697 Gene3D Transferase(Phosphotransferase) domain 1 450 644 - -
Vian2g00914 697 Pfam Protein kinase domain 373 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00914 697 CDD STKc_IRAK 379 641 - -
Vian2g00914 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Vian2g00914 697 Gene3D - 47 292 - -
Vian2g00914 697 ProSiteProfiles Protein kinase domain profile. 373 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00914 Vian-Chr2 15053960 15056053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00914 40 660 Receptor kinase-like Gene Family AT3G08870 50.869 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian2g00914 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00914 - - gmx:100802724 1103.2