Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00823 ATGGAATTGCCTGATACAGTCAGTACAGCCATGTACAAGGGGAGATTCTGCACTAGTGGTGGAGTTAAGTCTCAGCTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGCCGTTTCAGGGATGTTCTTGGCAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAGTTACTGGGGATTGAAGTAGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAACAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTGAAGCACCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGTACACTTAGAGAGTACAGGCAAAAGTATAAGCGAGTAGATATGCGAGCAGTTAAGATCTGGGCTCGCCAGATTCTTAGTGGCTTGGAGTATTTACACAGCCATAATCCTCCTGTAATACATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGAGACTTAGGCCTAGCAGCTATACTTCGTAGTTCTCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATATAACGAGCTGGTAGACATATATTCCTTTGGTATGTGCATGATAGAGTTGCTTACTTTTGAGTTCCCATACAGTGAATGCGCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCTAATGCGTTTTACAGAATCCCAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGTCAAATGTCTCAGATAGACCATCAGCAATGGAGCTCTTGTTGGACCCTTTTTTAGCTGTGGACCAACTTGAAATTCCATTGCCACCAAACATACCATTATTTCCAAATCACACTCTACAGCTTAATTCCGCTCCACTAGTTCCCATTGAGCATCATCATGATCAAACAAAGAGTGCAGAAATGACAATTACTGGTTCAATAAACGAAGAGAACAACACAGTTTTCCTCAAAGTGAGGATCTCTGACATAACAGGGCACACGAGGCATGTGTTCTTCCCATTTGATACATTAAAAGACACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTAGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAAGTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAACACAGCTTTAACTACGAAGAAGATGAAGATATCAATAACCACCACCCCTTCTTCTTATCATCTTCTCCATCATCCCCTCGTGGTTCTGGCCACATGTCTGCTTCCAACTCCTTCAAAACCCATGTTCGCGGCAATCATTACCCTTTTGCTCAAGAAGGGTATCAAGATGACATGTTCATGAACAACGACGACGTAAGCTCTCAAGCCTCGATGAACTCCTTCAAGTGTTCAACCTTCCAATTCTGCGACCCGGGCCACGAAGACGAGCACGACGGAACCGAACGCAACAAGTGCACCACATTATCGTGCCGTGGCGGCGAAGAAGGCGAACCTCGTTTGGCGAACCCGGTTTTGAACCCGCCGCGGATGGAGTGTTCGTGCGGGTGCAGGTTTGGGTCGGGTCACGGGTGCCCGAGGCTGACTCGGATCCGGTCGTGCCCACACGAGCGACGGAGCCTGCAGCTCCAACGGTCGATGATGTTGGAGGAGATTTACAAGTACAAAAGACGCTTCTTCAACACCATTGGTGCCGTTGAGAACATCGGGTTTCGGCATCCACTAAGAGGTGGTGTGTGCTTTCCTCGTGTGTAG 1869 0.4644 MELPDTVSTAMYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDMRAVKIWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIELLTFEFPYSECANPAQIYKKVTSGKLPNAFYRIPDLEAQKFVGKCLSNVSDRPSAMELLLDPFLAVDQLEIPLPPNIPLFPNHTLQLNSAPLVPIEHHHDQTKSAEMTITGSINEENNTVFLKVRISDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSALVPSWRDRVKCHHQRQHSFNYEEDEDINNHHPFFLSSSPSSPRGSGHMSASNSFKTHVRGNHYPFAQEGYQDDMFMNNDDVSSQASMNSFKCSTFQFCDPGHEDEHDGTERNKCTTLSCRGGEEGEPRLANPVLNPPRMECSCGCRFGSGHGCPRLTRIRSCPHERRSLQLQRSMMLEEIYKYKRRFFNTIGAVENIGFRHPLRGGVCFPRV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00823 622 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Vian2g00823 622 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00823 622 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00823 622 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 24 498 - -
Vian2g00823 622 FunFam probable serine/threonine-protein kinase WNK9 121 301 - -
Vian2g00823 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Vian2g00823 622 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00823 622 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Vian2g00823 622 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Vian2g00823 622 CDD STKc_WNK 36 296 - -
Vian2g00823 622 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00823 Vian-Chr2 12262629 12265770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00823 19 436 MAP Kinase Kinase Kinase AT3G51630 66.271 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian2g00823 Pkinase 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00823 K08867 - gmx:100272206 1069.3