Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00819 ATGAGTTTCCGAGAGGGAGAGTTAGGAGAAGAGAAGGAATGTGAAGAATCGGTGTTGGGGAGCACTGAATCCAAATCAGTGAGGGAAAATGGATCATTGGCAGCCACACAGTTTACAATTGATGAGAATTTATTGGTTGACCCTAAACTACTCTTTATAGGGTCCAAGATTGGTGAAGGAGCTCATGGGAAAGTATATGAAGGAAGGTATAGAGATCAAATTGTGGCAATCAAAGTTCTGCATCGTGGGAGCACTTCTGAAGAAAGAGTTTCCCTTGAAAATCGTTTTGCTCGAGAAGTTAATATGATGTCTCGTGTCCACCACGACAATCTTGTTAAGTTTATTGGAGCATGTAAGGATCCACTTATGGTAATAGTCACAGAGCTATTACCAGGGATGTCACTGCGTAAATATTTAATGAGTATCCGTCCTAAACGATTAGACCTTCATTTGGCTATCAACTTTGCTCTTGATATTGCTCGAGCATTGGATTGGCTACATGCTAATGGGATCATACACAGAGATCTAAAACCTGACAATCTGTTGCTTACAGCGGACCAGAAGTCTGTTAAACTTGCTGATTTTGGCCTCGCAAGAGAAGAAACTGTGACTGAAATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCACCAGAGCTGTACAGTACTGTGACTTTGCGTCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTATATAGCTTTGGAGTTGTTCTGTGGGAGCTACTAACAAACCGCATGCCATTTGAAGGGATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCGAGCATACCAGGTGATATATCCCCTGAGCTTGCTTTTGTGATACAATCATGCTGGGTTGAAGATCCTAACTTGAGACCGAGTTTTAGTCAGATCATTCGCATGCTCAATGCATTTCTCTTCACTCTCTCACCACCATCTCCTCCTTTGCCAGTACCTAACAATGAACCTGAGGTGGCTACAACCAGCAATGGCACCATTACTGAGTTTTCTGCCCGAAACAAAGGAAGGTTTGGCTTTCTTCGCCAATTGTTTTCTTCAAAGAGGACCAAAAACTAA 1107 0.4282 MSFREGELGEEKECEESVLGSTESKSVRENGSLAATQFTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRDQIVAIKVLHRGSTSEERVSLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLMSIRPKRLDLHLAINFALDIARALDWLHANGIIHRDLKPDNLLLTADQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGVVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDISPELAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPVPNNEPEVATTSNGTITEFSARNKGRFGFLRQLFSSKRTKN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00819 368 ProSiteProfiles Protein kinase domain profile. 51 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00819 368 SMART serkin_6 51 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00819 368 Pfam Protein tyrosine and serine/threonine kinase 53 312 IPR001245 GO:0004672|GO:0006468
Vian2g00819 368 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 313 - -
Vian2g00819 368 ProSitePatterns Protein kinases ATP-binding region signature. 57 78 IPR017441 GO:0005524
Vian2g00819 368 MobiDBLite consensus disorder prediction 1 26 - -
Vian2g00819 368 Gene3D Transferase(Phosphotransferase) domain 1 133 323 - -
Vian2g00819 368 CDD STKc_MAP3K-like 57 312 - -
Vian2g00819 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Vian2g00819 368 MobiDBLite consensus disorder prediction 1 19 - -
Vian2g00819 368 SUPERFAMILY Protein kinase-like (PK-like) 48 337 IPR011009 -
Vian2g00819 368 Gene3D Phosphorylase Kinase; domain 1 39 130 - -
Vian2g00819 368 FunFam Kinase suppressor of Ras 1 40 130 - -
Vian2g00819 368 PRINTS Tyrosine kinase catalytic domain signature 165 183 IPR001245 GO:0004672|GO:0006468
Vian2g00819 368 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Vian2g00819 368 PRINTS Tyrosine kinase catalytic domain signature 127 140 IPR001245 GO:0004672|GO:0006468
Vian2g00819 368 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00819 Vian-Chr2 12154769 12157841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00819 39 368 MAP Kinase Kinase Kinase AT5G01850 74.011 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vian2g00819 PK_Tyr_Ser-Thr 4.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00819 - - gmx:100816708 577.785