Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00803 ATGAGTTCCGATGAGACCTTGCTATTGGAATCGGATCCACGTCCTGTGATTGTTCACCGCCGCGGGAAATCGGGTTCCCGGACCTACCTCTGTGGCCATGGTTCCTTCTCGTCTTCGGTGTTCGAGGCGGCTATTGCTGACATCGGCGATTTGGATGTGAAGGAGCGAAACAAGGAGGTTTTGTCTAGCGATTGCAGCTTCCAGACTGCGTCGTTTAGTAATAGTAACATCTCTGATAGGTGTGCTGTCGAGTCGAAGTTCCCCTGGCAGTTTCCCTTGGAATGCCCCACGCGCGAGAGGAGGCGCTCGGCATCGTGGGGTGCAATGGAACTGCATGGTGCTGATAACCGGAGTGTTCCCTTTGAGATATCCGGAGCTTCGTCTCATGTGCAGGATAGGTTGAATAGTAAATCGCAGAGGATTAGGCATAGGAGTGTGCAATTTGATGATCCTGCTTTTCAGGAGGATGGTGCCAGGTTGATCTATATTAATGATCCCAGGAAGACCAACGACAAGTATGAGTTCACTGGGAACGAGATCCGAACTAGTAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTTTTCATTCAGTTTCATAGGGTTGCGTATCTGTATTTCCTTGCTATTGCAGCGCTCAATCAACTTCCTCCACTGGCTGTGTTTGGGAGGACTGTGTCTCTTTTTCCTCTGTTGTTTGTGCTTTGTGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGCGGCACAGGTCAGATCGCAATGAAAACAACCGGGAGTCTCTGGTGCTTCAGTCCGGTGATTTCCGATCGAAGAAGTGGAAAAAAGTACAAGCTGGGGAGGTTGTTAAGATCTTTGCTGATGAGACAATTCCGGCTGATATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACCATGAATTTGGATGGAGAGTCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCTTCGGTGGTTACTTCGGAATCTTGTGATGTTTTTGGTGTAATTAGGTGTGAGCAACCGAACCGGAATATTTATGAGTTCACTGCTAACATGGAGTTCAATGGACTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTCCGTGGCTGCCAGCTTAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCAGGGCAGGAAACAAAAGCAATGCTGAACAGCGCAGCTTCTCCTTCCAAGAGAAGCAGACTTGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCTGTTTTTCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTACGCCACAAGAACCAGCTGGATACCTTGCCTTACTACAGAAAAATATACTTCACCAACGGACCCGATAATGGAAAGAAATACAAGTATTATGGGATTCCAATGGAAGCATTTTTCTCCTTCTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGCCAGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAACGAAGATTTGGGTCAAATACGCTATATATTTTCGGACAAGACTGGAACACTCACAGAAAACAAAATGGAATTCAAGAGGGCAAGCGTACATGGGAAGAATTATGGGAGCTCCTTGCATGCTGTTGATCATACAGCTGTGGATGTTACTCCTAAACGCAGATGGAAGCTCAAATCTGAACCTGTAGTGGATTCTGAACTGATGATGATGTTACGGGAAAACTCCAATAGAGAAGAAAGAGTTTCTGGTCATGAGTTTTTTCTTACACTGGCTGCTTGTAACACTGTAATCCCTATACTTGGTGATGGTGGATTTTCAAGACATGGAACAAATGAATTAAAAGATGATATTAGATGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGATATACTCTTTTTGAACGTACATCAGGACATATCGTTATTGACGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGTCTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGCGGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAGTGAGAGTAACAATAACATACTGCACACAACTCAGAGCCATTTGAACGAGTATTCTTCACAAGGTTTGCGCACTCTTGTGATTGGCTCCAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCTGTTATGAAGAGGCAAGCACTTCGTTGACTGACAGAGCTACTAAACTAAGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAGGAGGGAGTACCAGAAGCCATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGGTTGAATGTAGAAGTCTTCTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGTCGTCGGAGTTCGAAACACAAAACCAATGCTGGACATGGAGATCTTGATATTCCCAATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCTTCAGATTTTGCAATGGGACAGTTTCAGTTTTTAAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTGTACCTACTATTATTGTTGGTATTCAAGATAAGGACTTGAGTCATAGGACACTCTTGCAGTATCCTAAGCTGTATGGTTCAGGTCACAGGCAAGAAGCGTACAATATGCAACTATTTTGGATCACTATGATTGATACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACCTATAAGGACAGTTCAATTGACATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGTGCACCTTGGTATGGACATTAACCGTTGGGTATTAATTACTCATGTTGCGATCTGGGGTTCGATTATCATTACGTATGGTTGCATGGTGATATTGGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATAACAATTTTACTTATAATTATTGTGGCATTGCTCCCTCGCTTTATTTGTAAAGTTGTCTATCAAATTTTTTGGCCTTCGGACATCCAGATAGCTAGAGAAGCTGATTTAATGAGAAAACGACATGCTACTTTGCGGCCAAGGCTCCAAGTTTCCAGTTAA 3636 0.429 MSSDETLLLESDPRPVIVHRRGKSGSRTYLCGHGSFSSSVFEAAIADIGDLDVKERNKEVLSSDCSFQTASFSNSNISDRCAVESKFPWQFPLECPTRERRRSASWGAMELHGADNRSVPFEISGASSHVQDRLNSKSQRIRHRSVQFDDPAFQEDGARLIYINDPRKTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKVQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASVVTSESCDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLESYMNRETLWLSVFLFIMCLVVAIGMCLWLVRHKNQLDTLPYYRKIYFTNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFKRASVHGKNYGSSLHAVDHTAVDVTPKRRWKLKSEPVVDSELMMMLRENSNREERVSGHEFFLTLAACNTVIPILGDGGFSRHGTNELKDDIRCIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGSESNNNILHTTQSHLNEYSSQGLRTLVIGSRDLSDAELEEWQSCYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRSLLADAKAKYGVKSSSGGRRSSKHKTNAGHGDLDIPNGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIIVGIQDKDLSHRTLLQYPKLYGSGHRQEAYNMQLFWITMIDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLGMDINRWVLITHVAIWGSIIITYGCMVILDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFICKVVYQIFWPSDIQIAREADLMRKRHATLRPRLQVSS 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00803 1211 CDD P-type_ATPase_APLT_Dnf-like 177 1077 - -
Vian2g00803 1211 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 147 895 - -
Vian2g00803 1211 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 554 829 IPR023299 GO:0000166
Vian2g00803 1211 Pfam Phospholipid-translocating ATPase N-terminal 161 226 IPR032631 -
Vian2g00803 1211 PRINTS P-type cation-transporting ATPase superfamily signature 839 849 - -
Vian2g00803 1211 PRINTS P-type cation-transporting ATPase superfamily signature 548 562 - -
Vian2g00803 1211 PRINTS P-type cation-transporting ATPase superfamily signature 917 936 - -
Vian2g00803 1211 MobiDBLite consensus disorder prediction 894 914 - -
Vian2g00803 1211 Pfam Phospholipid-translocating P-type ATPase C-terminal 945 1185 IPR032630 -
Vian2g00803 1211 SFLD Haloacid Dehalogenase 532 968 - -
Vian2g00803 1211 Gene3D - 558 574 IPR023299 GO:0000166
Vian2g00803 1211 SUPERFAMILY Calcium ATPase, transmembrane domain M 175 1184 IPR023298 -
Vian2g00803 1211 Gene3D - 531 544 - -
Vian2g00803 1211 SUPERFAMILY HAD-like 535 961 IPR036412 -
Vian2g00803 1211 Gene3D - 234 404 - -
Vian2g00803 1211 SFLD p-type atpase 532 968 IPR044492 -
Vian2g00803 1211 Gene3D - 653 795 IPR023299 GO:0000166
Vian2g00803 1211 Pfam Cation transport ATPase (P-type) 663 737 - -
Vian2g00803 1211 ProSitePatterns E1-E2 ATPases phosphorylation site. 550 556 IPR018303 -
Vian2g00803 1211 Gene3D - 545 557 IPR023214 -
Vian2g00803 1211 Pfam E1-E2 ATPase 259 506 - -
Vian2g00803 1211 FunFam Phospholipid-transporting ATPase IC 545 557 - -
Vian2g00803 1211 NCBIfam phospholipid-translocating P-type ATPase 175 896 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian2g00803 1211 Gene3D - 812 906 IPR023214 -
Vian2g00803 1211 Gene3D - 907 957 IPR023214 -
Vian2g00803 1211 SUPERFAMILY Calcium ATPase, transduction domain A 258 400 IPR008250 -
Vian2g00803 1211 NCBIfam HAD-IC family P-type ATPase 481 573 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g00803 1211 NCBIfam HAD-IC family P-type ATPase 920 1003 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g00803 1211 NCBIfam HAD-IC family P-type ATPase 807 864 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g00803 1211 FunFam Phospholipid-transporting ATPase 658 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00803 Vian-Chr2 11850370 11855756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00803 138 1194 Primary Pumps ATPases AT5G04930 54.505 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00803 K14802 - gmx:100789830 1601.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00803 2 11850370 11855756 Vian2g00803 2 11850370 11855756 ECH
Vian2g00803 2 11850370 11855756 Vian9g01555 9 31865758 31870960 PCT