Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00765 ATGCTTTTCACCTTTTGGTATTATTTGATACGAAGAAAGATCAGAAAAAATAAAAGAACTATTCTTCAAGAGAATTTTGGACAAGAAATTTCAACTATAGAATCTCTGCAATTCAATCTACCAATAATTGAAGCAGCAACAAATAACTTCTCACATGACAACAAAATCGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTTATGATGGACAATCCATTGCTGTAAAGAGACTTTCAAGAAATTCTAGACAAGGCATACAAGAGTTTAAAAATGAGATTCTACTAATAGCCAAACTTCAACATAGAAATTTGGTGGCTTTCATAGGATTTTGTCTTGATGAACAAGAAAAAATACTTATTTATGAATATGTGCCAAACAAGAGTCTAGACTACTTCTTATTTGATTTTGGACTTGCTAGAATTGTTGAAATAGATCAAGAAGAGGAAAGTACAAATAGAATTATTGGCACATATGGCTATATGTCTCCAGAGTATGCTATGTTTGGACACTTTTCTGAGAAATCTGATGTTTACAGTTTTGGTGTTATGATTCTAGAGATTATAAGTGGAAAAAAGAATAAAGGTTCACATGAATCTCGCATTGCTGACAGTCTTATAAAATTTGTTTGGAGACACCAGAAGGATGAAACAACATTGAACACATTAGATTCAAAATTAAGAGAAAATTATTCTAACATTGAAGTCATGAGATGCATTCAAATTGGTATATTATGTGTTCAAGAAGATCCAGATGCTAGACCTACAATGGTAGAAATTGTTTCATATCTTAGAAGTCACACAATTGAGTTGCCGCCTCCACAAGAACCAACATTTCACTTGAGTCGTAAAATAAATCCAATTGCTGCACATGAATCAAGTTCAGGCCAAGATGGCAGCAACTCCATACCATATTCTATCAATGCCTTATCTATAAGTGAATTTTATCCTCGCTAG 960 0.3292 MLFTFWYYLIRRKIRKNKRTILQENFGQEISTIESLQFNLPIIEAATNNFSHDNKIGKGGFGEVYKGILYDGQSIAVKRLSRNSRQGIQEFKNEILLIAKLQHRNLVAFIGFCLDEQEKILIYEYVPNKSLDYFLFDFGLARIVEIDQEEESTNRIIGTYGYMSPEYAMFGHFSEKSDVYSFGVMILEIISGKKNKGSHESRIADSLIKFVWRHQKDETTLNTLDSKLRENYSNIEVMRCIQIGILCVQEDPDARPTMVEIVSYLRSHTIELPPPQEPTFHLSRKINPIAAHESSSGQDGSNSIPYSINALSISEFYPR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00765 319 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 136 - -
Vian2g00765 319 Gene3D Phosphorylase Kinase; domain 1 11 125 - -
Vian2g00765 319 SUPERFAMILY Protein kinase-like (PK-like) 36 289 IPR011009 -
Vian2g00765 319 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Vian2g00765 319 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00765 319 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 11 125 - -
Vian2g00765 319 Pfam Protein tyrosine and serine/threonine kinase 53 135 IPR001245 GO:0004672|GO:0006468
Vian2g00765 319 Pfam Protein tyrosine and serine/threonine kinase 137 265 IPR001245 GO:0004672|GO:0006468
Vian2g00765 319 Gene3D Transferase(Phosphotransferase) domain 1 134 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00765 Vian-Chr2 11076990 11078597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00765 7 319 Receptor kinase-like Gene Family AT4G23140 41.114 1.01e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian2g00765 PK_Tyr_Ser-Thr 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00765 - - gsj:114397380 440.654