Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00761 ATGGCTGCTTGTGCTTTGTTCAGTGCTGCCACTAACATTACCGAAGATGGGAATGTTAACAACGCAACTGCAAGTGCTGCTAGTCCTCTCACCAGTGCTTCTAACTCCAGCAACATGAGCAACGACGACCAACACACCCTACATGGCATCGTCCCACAGCCTCATTGTGAGAGGAAAATCGTCAGGAAAAGAATGGCTTCTGAGATGGACCATCTTAACGTTCATCTCACTCCACCACACAACTCTTCTTCCACCACTGATTATCCTAGGTTTCCTCGTCGAAGCTCCACCAACGTCAACATGTCATCCTTAGAAAAAGGGTCCACCACCACCACACCTACGTTAGCCGCAGGTACTTGTAGTAATAATGGCAATAATAATAATACTAGTAATAACTATCATTTTAATAATAGCAACCATAATAGTAGAAGTGGTAATATTTCGTCAAGAGATAACGTTGGCATTCCAAATTACCCCACTGTGGCCGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCACCACCATCAATACCTCTGGTGTTGCTCCAAACTACAGTGCTCACCAACACCATCATTTCCAAGGGCTTGTTGAAAGTCAAAGCCAGGACCAGCAGAACCCCGTGCCTGCAGTGTGTGGATTCTCGGGATTACCACTTTTTCCATCTCAAAGCCAAAGGAACCGAGACGACAACAACAACATGAACAACACCGCCACCACCAACCTAAGAACCAGTGGTGGAAATATTGTCGACGTGGTTGCTTCTTCTTCTTCTTCTCCTTCCATGGACGACACTTCGGCCGCCACGAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCAAACAGTGTTTCGATTCCCCAACTAATCAGCAACGTGAGGGAGATTATATACCCTTGCAACCCCAACCTTGCAACGATTCTTGAATACAGGTTGCGTCTTCTCACTGAGTCCGCCCCACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCACCTTCTGTGTCCTCAGTGAAGCTCGTGAATAATCGTGTGGATGGCATTGTTCCTAATCTGCACTTCACAGATGGATCAGGTGGTCCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCCAATCACTCACCACCACGATAGCAACGCCAACAACAACAGCAACACCAACAATAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCGCCACCACCACCCCATTATTCACCGCCACAAGAGAAGCAGCCTCACCCTCAAGAGGAAGATCTAGCAGCAACCAGCAGTGCTGAGGTGGCACTCACAAGAAAGAAGAAAGAAGAGTTGCGGGAACAGAAGAAGAAAGACGAGGAGGGTCTGCATCTCCTCACTTTGCTGCTGCAGTGTGCAGAAGCTGTTTCAGCTGAGAATCTAGAAGACGCCAACAAGATGTTGCTAGAGATTTCCCAATTATCAACACCGTTTGGCACATCAGCACAGCGTGTGGCCGCTTATTTCTCGGAAGCCATATCAGCAAGGTTGGTGAGTTCATGTTTGGGGATATATGCCACTTTGCCACACACCCATCAAAGCCACAAGGTGGCATCGGCTTTCCAAGTGTTCAACGGAATCAGTCCTTTCGTGAAGTTCTCACATTTCACAGCAAACCAAGCTATCCAAGAAGCTTTTGAAAGGGAAGAGAGGGTGCACATCATAGATCTGGACATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTCTACATTCTAGCTTCAAGACCTGGTGGAGCCCCTTATGTGAGGCTCACGGGGCTTGGTACTTCCATGGAAGCACTTGAAGCCACGGGTAAACGTTTGTCCGATTTTGCAAACAAACTTGGTCTTCCCTTTGAGTTCTTCCCGGTGGCTGAGAAAGTAGGGAACCTTGACCCTGAGAGGCTCAACGTTAGCAAAACCGAAGCTGTTGCAGTTCACTGGTTGCAACATTCCCTCTATGATGTCACCGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTGGCACCTAAAGTGGTGACTGTGGTAGAGCAAGACCTAAGCAACAGTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCGGCGTTGTTTGACTCTCTTGGGTCTAGCTATGGGGAGGAGAGCGAAGAGAGGCATGTGGTGGAACAACAGCTATTGTCTAGGGAGATTCGAAATGTGCTAGCTGTTGGAGGGCCATCAAGAACTGGGGAGCCAAAGTTTCACAACTGGAGGGAGAAGTTTCAGCAGTGTGGATTTAGAGGTATATCTCTAGCTGGTAATGCTGCAACTCAAGCTAGTCTACTCCTTGGTATGTTCCCATCAGAGGGTTATACCTTGGTGGAGGACAATGGCATCCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCTCCATTCCATAGTGGCACTGCCATTACACATCACAACTAG 2496 0.48 MAACALFSAATNITEDGNVNNATASAASPLTSASNSSNMSNDDQHTLHGIVPQPHCERKIVRKRMASEMDHLNVHLTPPHNSSSTTDYPRFPRRSSTNVNMSSLEKGSTTTTPTLAAGTCSNNGNNNNTSNNYHFNNSNHNSRSGNISSRDNVGIPNYPTVAVTTNYSTMLLPSSTTINTSGVAPNYSAHQHHHFQGLVESQSQDQQNPVPAVCGFSGLPLFPSQSQRNRDDNNNMNNTATTNLRTSGGNIVDVVASSSSSPSMDDTSAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLATILEYRLRLLTESAPQNKRGTEGVPLPPSVSSVKLVNNRVDGIVPNLHFTDGSGGPVVVNQHMLSNWGVPPITHHHDSNANNNSNTNNNPSVSLVTLPSPPPPPHYSPPQEKQPHPQEEDLAATSSAEVALTRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFYILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNSGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKFQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHSGTAITHHN 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00761 831 MobiDBLite consensus disorder prediction 76 131 - -
Vian2g00761 831 MobiDBLite consensus disorder prediction 405 421 - -
Vian2g00761 831 MobiDBLite consensus disorder prediction 385 404 - -
Vian2g00761 831 MobiDBLite consensus disorder prediction 221 248 - -
Vian2g00761 831 MobiDBLite consensus disorder prediction 379 437 - -
Vian2g00761 831 Coils Coil 432 452 - -
Vian2g00761 831 ProSiteProfiles GRAS family profile. 453 818 IPR005202 -
Vian2g00761 831 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 422 813 IPR005202 -
Vian2g00761 831 MobiDBLite consensus disorder prediction 74 131 - -
Vian2g00761 831 Pfam GRAS domain family 463 818 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00761 Vian-Chr2 10971419 10974496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00761 444 821 GRAS Transcription Factor Family AT5G41920 55.013 2.90e-140 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian2g00761 GRAS 2.4e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00761 - - gmx:100806779 1290.79