Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00744 ATGAATACCGGTAACAGTAACAGTAATGGTAACAATAGTTCTGGTAGCCCTTGTGGGGCTTGCAAATTCCTCAGAAGGAAATGCATTCAGGGTTGTATCTTTGCTCCGTATTTTGATGCGGAGCAAGGGACAGCCCATTTCGCTTCTGTGCACAAGGTTTTTGGGGCCAGTAACATGTCCAAGCTTCTCCTTAGCATTCCTGTGCACAAGAGGCTTGATGCTGTCATCACCATTTGTTATGAAGCACAATCACGCCTCAGAGATCCTGTTTACGGCTGTGTTTCCCACATCTTTGCCCTTCAGCAACAGGTGGTGAGCTTGCAAGCAGAACTCTCATACCTACAAGGCCACCTTGCCCAGATGGAGGGACCTCATCCGCCGCCACCTCCTCCATCTCAATCGGCGACGGCACTGCGATTCTCAATGGCTGATTTACCATCGGCGGCCACCGGAGCTGTGGCGCCGGCCACCACCTATGACTTGTCTTCACTTTTTGATACGTCGGGGCAAATTACATGGGCCATGCAACAAAGGGCATTAGACCCACGTCAATACGTGGCAGCTCCTCCATCAAGTTCTACTAGGGCTAACGTGGAAGCAGTGGCACGTGACCTTGCTCGTAGGCATGGCTCTCCTCCATCACCTCCTGCATCAAGCTGCAATGCTTCACCATCTCTATCTCTTTCCAAATGA 693 0.5108 MNTGNSNSNGNNSSGSPCGACKFLRRKCIQGCIFAPYFDAEQGTAHFASVHKVFGASNMSKLLLSIPVHKRLDAVITICYEAQSRLRDPVYGCVSHIFALQQQVVSLQAELSYLQGHLAQMEGPHPPPPPPSQSATALRFSMADLPSAATGAVAPATTYDLSSLFDTSGQITWAMQQRALDPRQYVAAPPSSSTRANVEAVARDLARRHGSPPSPPASSCNASPSLSLSK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00744 230 MobiDBLite consensus disorder prediction 186 230 - -
Vian2g00744 230 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 136 - -
Vian2g00744 230 MobiDBLite consensus disorder prediction 214 230 - -
Vian2g00744 230 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
Vian2g00744 230 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00744 Vian-Chr2 10686128 10689394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00744 20 230 AS2 family AT2G45420 54.348 1.48e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vian2g00744 LOB 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00744 K21994 - gmx:100777737 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00744 2 10686128 10689394 Vian2g00744 2 10686128 10689394 ECH