Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00738 ATGGAGGTTCCTAAGAAGATTTTTGGTATTAACAATGGTGAAAAAGGCTACAAAACAGCTCATTTGCCTGGAAGAGTTCGGGTGGCTGTAAGATTGAGACCACGAAATGCTGAAGAAATGATGGCTGATACTGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGTAGAAACAATTGGGATTCTGACACATATGAGTTTGATGAGGTGCTTACTGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACACTTGGACGACTTGGGGAAGTTGACACTTCTGATCGTGGTATCATGGTCCGTTCCATGGAGGATATTTTTGCTGACTTGTCACCCAATACTGATTCTGTCACAGTCTCGTATCTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGTAAATGATAATATTCCTATAGTGGAGGATCCAAGAAGTGGTGATGTATCTATGCCTGGGGCAACTCTTGTAGAAATCACAGACCAACATAGTTTTCTGGAGCTGTTAAGAGTAGGGGAAGCTAATAGAATTGCTGCTAACACAAAATTGAATACTGAATCTTCTCGCAGTCATGCTATTCTGATGGTTCATATTAAGAGGTCTGTCTTGGAAAGTGAAGATATTGTATCCAGTCAAAATGGCGATGCCTCTCATTTGACTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCAGGTTCAGAACGTGTCCACAAGTCCGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCATTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGAATGCTTCGAGACTCTTTTGGTGGCACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCACCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAGAGGGCTATGAAAGTTGAGAATATGTTGAAAATAAAGGAGGAATTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTACAATTAGATAAGCTTATTGCAGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGATGAAGTTGAGAAAATAAATTTGGAGGCCCAATGTCGAATTGCCGAGGTGGAGAGGAACTTTGCAGATGCATTGGAGAGCAGGTTAGGGTTTGCCGTTCGCCACTGCTCACTGCCCGCCTCCGCATCCGCTGTCGTTCACCGTCGCTTCCGCCGCCGTCGTCGCCGCTTTCCGCCGTCGCAATCTTTTTTCGGCGAAGTTAAGGGTTCGGTGCGCCTCGACGAGCGCGACCCATCCCTGGTGGTCGCCGCCTCATCCTTCTCTCGACGCGCCATCACGCGTCGTTTCTTTTTGACCTCTCTTGGGTGCAATTTCTTTGTGGCTGATTCTGTAAAAGGCCTAAACAAGAAGCTTGATAACTTAGTTACTCGACTTCTTCGGAGGCAACCGAGGAGAACGTGTGGTTGGAAGCATCTCCCCCTCACGACAAACGACGGAAATGATGATGCCGTCGATGACAAATCGCTAAGGAATAATGCTGAAACAGAGAAAGAGAGACTGAAATGCCAGATGGAGTACATGGAATTGGTAAAGGAGTTGGAGCAGAAGCTGGTCTTGAATCAAGAAAGACATGACTGCAATAGTTCTGTCGCTGGTAATGGAGAGATATCTATCATACTCAGATTGGATTTGATGCTATCACGTGAAGTTACTGAGGTCAAAATACTGCTTGAAACTGAAAGAAGTCGGAGGAAGGCAGCTGAAGAAGAGGTAGAGCATCTAAAAAATCAACTGGGGAAATACACACAAACACAGATGAGAAAGTGTTTGGAAAATGGAAGCTCTGGTAGCACATTTTCTGCCATGGATTCCTCCCGGCCTAACCAATTCAAGGACACTGCAAATGGTCAGAAGTCATCTGTTGCTACTCTCTTTGAGCAAGTTGGACTGCAAAAGATTTTATCGTTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTAGCCAACCTAGCTGCAGAAGAGGCTAATCAAAAGAGAATTGTTGAGTCTGGGGGGCTTACTTCCTTGCTGATGCTTCTTCGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCAATTGCCAATCTTGCTATGAATGGTGAATATCAAGCGAATCAAGAACTTATTATGGCTGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGGGCAATTGCTAACTTATGTGGAAATGATAGAATATTGATGACTCTGAGATCCCAGGGAGGTATTAAGGCTTTACTGGGAATCGTAAGATGTGGACATCCCGACGTCCTTTCCCAAGTTGCACGAGGAATTGCAAACTTCGCAAAATGCGAGTCTCGAGCTTCCAATCAAGGGATAAAAAGTGGCAGATCTTTTTTGATAGAAGATGGTGCACTTCCATGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACTTAGAGCTTGCACTCTGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACCTGGTTAGTGGAGGTGCTCTTTGGGAGCTTGTTCGAATTTCACGAGATTGTTCACGAGAGGATATACGGAATCTTGCTCGTCGGACTCTTATGAAGCAGCAGGGGTTTAGCATCTACTTGTTATGTAGCCATTACTGA 2880 0.4413 MEVPKKIFGINNGEKGYKTAHLPGRVRVAVRLRPRNAEEMMADTDFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEVDTSDRGIMVRSMEDIFADLSPNTDSVTVSYLQLYMETLQDLLNPVNDNIPIVEDPRSGDVSMPGATLVEITDQHSFLELLRVGEANRIAANTKLNTESSRSHAILMVHIKRSVLESEDIVSSQNGDASHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKINLEAQCRIAEVERNFADALESRLGFAVRHCSLPASASAVVHRRFRRRRRRFPPSQSFFGEVKGSVRLDERDPSLVVAASSFSRRAITRRFFLTSLGCNFFVADSVKGLNKKLDNLVTRLLRRQPRRTCGWKHLPLTTNDGNDDAVDDKSLRNNAETEKERLKCQMEYMELVKELEQKLVLNQERHDCNSSVAGNGEISIILRLDLMLSREVTEVKILLETERSRRKAAEEEVEHLKNQLGKYTQTQMRKCLENGSSGSTFSAMDSSRPNQFKDTANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVESGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNGEYQANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHLELALCHLAQHEVNAKDLVSGGALWELVRISRDCSREDIRNLARRTLMKQQGFSIYLLCSHY 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00738 959 PANTHER CENTROMERE PROTEIN E 25 658 IPR027640 GO:0003777|GO:0007018
Vian2g00738 959 FunFam Kinesin-like protein 17 397 - -
Vian2g00738 959 ProSiteProfiles Kinesin motor domain profile. 25 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g00738 959 Coils Coil 383 425 - -
Vian2g00738 959 PRINTS Kinesin heavy chain signature 268 286 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g00738 959 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g00738 959 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g00738 959 CDD KISc 25 365 - -
Vian2g00738 959 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 741 787 IPR000225 GO:0005515
Vian2g00738 959 Pfam Kinesin motor domain 31 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g00738 959 Gene3D Kinesin motor domain 16 397 IPR036961 -
Vian2g00738 959 FunFam Kinesin-like protein 679 864 - -
Vian2g00738 959 Pfam Armadillo/beta-catenin-like repeat 733 770 IPR000225 GO:0005515
Vian2g00738 959 MobiDBLite consensus disorder prediction 665 685 - -
Vian2g00738 959 Gene3D - 605 947 IPR011989 -
Vian2g00738 959 Coils Coil 562 582 - -
Vian2g00738 959 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 700 742 IPR000225 GO:0005515
Vian2g00738 959 SMART arm_5 775 816 IPR000225 GO:0005515
Vian2g00738 959 SMART arm_5 690 729 IPR000225 GO:0005515
Vian2g00738 959 SMART arm_5 817 857 IPR000225 GO:0005515
Vian2g00738 959 SMART arm_5 730 771 IPR000225 GO:0005515
Vian2g00738 959 Coils Coil 622 656 - -
Vian2g00738 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 402 IPR027417 -
Vian2g00738 959 ProSitePatterns Kinesin motor domain signature. 267 278 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian2g00738 959 SMART kinesin_4 23 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian2g00738 959 SUPERFAMILY ARM repeat 691 944 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00738 Vian-Chr2 10471884 10491915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00738 22 414 Calmodulin-binding Proteins AT5G65930 34.146 5.21e-46 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00738 - - gmx:100779873 1145.95