Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00734 ATGGCTACTCATCTTGCTACAGCAAAGGCCACCGGGACGACGTCGTCTCAGGATAAACGACACCGTTCCATCTTCGATGTTCCGTCGAATTTCTTCGACTCTTCTCGCCTTCTTCCTTCTCCACACTCTTCCGTTTCCAATCACCACACCGTAGACCAAACCCAAACCCTTGAACCCTCCTCAAACGACGTCGTTATTTTTGATGATTCTCAAAACGCTGTAGTTTCCGCGCCTAGGTTGACCTGCAATACCTGCAGAACTCAATTTGATTCCCTCCAAGATCAGCGTGGCCATTTCAAATCCGACATTCATCGGTTCAACGTGAAGCTGACAATTGCGGGAAAGAATATTGTGAAGGAAGAAGATTTTGAGGTGCTGACATCTGAATTTGTCAAAGACTATGATATGTCAAGTATATCGGGATCAGAAAGTGATGATTCACAAAGTGAAATTGTACTGCATGACAAATCGAGTGAAAATTTTAAACAGAAACTCTTCTTCCTTCTTCAGACAGGGCTGAGAGTTTCTGTCTGGAAGTGCTTGATCATGAATGTGACTGAAAATGTATTGTATGATGATGAAAAGGCGGAGAATGACGTTGTTCAGAAGTTGAAATCGCTGACTGCTGAGCCCAGAAACAATACCCAGTTGAGGATTGTTCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTCTTTGATGGTGATGTTGTTGTGGCTCACAAGACATTTCATAGATATGTTGTGCGGGCCAAGGCAGGAAAAAAACAGTCATCTAAAGATGCTTCTGGCAGGTCTATACATTCTGCCGGGGCCTCACTTCGTCGTTATAATGAACTTGCATTAAAGAAGGAAGTGCATGAACTGTTTACAGCTTGGAAACCCTATTTTGATGTCTCCAATTGCGTATTTATTCATGCTCCTTCAAGTAGTCGTCAACTGCTTTATGATGGAGAAAGACCATATTTTGGTAATCAGCACTGTACTGTTAGAAACATTGCTTTGAGTGTTCGGAGGCCCACGTTCAGGGAGGTAAAGCGTGTATATAGTCATTTGACTCAGGTAACCTACGAAGGTGATGAGAAGGAAGTTTTACAGAGCAAACAAGAGGATTTGGTATCAGTTCCCATTTCTAAAATAAATGGCAGTCCAATCTCCAACCAAGGGAATGGGGCTGCGTTGCATGACAAAGATAAAGCTGAAGCTTGTTCAAGTAAGAAAAATGATGAACTTTCCATTTCGAGTAATGGAGAAAGTGAGAATGAGCTATCTGGTAAATCAACTCCTTTACATCAGGCAGCCCAATCTGGTGACTCTGTAAAGGTTTTGGAACTCCTGGAACAGGGCTTGGATCCTTGCTCCACAGATGAAAGGGGACGGACCCCATATATGTTGGCACATGACAAAGAAGTGAGGAATAATTTCAGAAGGTTTATGGCATCAAATCTTGACAAATGGGATTGGCATGCTGCCAAAGTACCCAGTGCATTGACCAAAGAAATGGAAGAGTCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCAAGAGCAAAGGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGTTGAAGCCACCTTGCCAAAGAATGATTCCAAAACTGTGGAGAAGCAAGTAACAGCTTCATCATCGATAAAGGGACAATCTCAACTAAAAAGTGGCGTGCAATTATCCAAAGAGGACCAAATAAGAATGGCACAGGCTGCCGAAAGAGAAAAGCGAGCAGCTGCTGCTGAGAGGAGAATAGCTGCCCTCAATATTCAAGCTAACAGTACAACCGCTGCACCAAGCATGTCAGGGCCTAAAAGTGGATTAGCCGGTGACATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGCAAAGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACATCATGCATGCATGTACACAAGGACATCCTAGACGATCAATGA 1983 0.4322 MATHLATAKATGTTSSQDKRHRSIFDVPSNFFDSSRLLPSPHSSVSNHHTVDQTQTLEPSSNDVVIFDDSQNAVVSAPRLTCNTCRTQFDSLQDQRGHFKSDIHRFNVKLTIAGKNIVKEEDFEVLTSEFVKDYDMSSISGSESDDSQSEIVLHDKSSENFKQKLFFLLQTGLRVSVWKCLIMNVTENVLYDDEKAENDVVQKLKSLTAEPRNNTQLRIVLLASGGHFAGCVFDGDVVVAHKTFHRYVVRAKAGKKQSSKDASGRSIHSAGASLRRYNELALKKEVHELFTAWKPYFDVSNCVFIHAPSSSRQLLYDGERPYFGNQHCTVRNIALSVRRPTFREVKRVYSHLTQVTYEGDEKEVLQSKQEDLVSVPISKINGSPISNQGNGAALHDKDKAEACSSKKNDELSISSNGESENELSGKSTPLHQAAQSGDSVKVLELLEQGLDPCSTDERGRTPYMLAHDKEVRNNFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQVEATLPKNDSKTVEKQVTASSSIKGQSQLKSGVQLSKEDQIRMAQAAEREKRAAAAERRIAALNIQANSTTAAPSMSGPKSGLAGDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKDILDDQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00734 660 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g00734 660 Pfam Bacteroidetes VLRF1 release factor 219 357 IPR041175 -
Vian2g00734 660 MobiDBLite consensus disorder prediction 540 566 - -
Vian2g00734 660 Pfam Vms1-associating treble clef domain 623 655 IPR041540 -
Vian2g00734 660 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Vian2g00734 660 SUPERFAMILY Ankyrin repeat 427 478 IPR036770 -
Vian2g00734 660 Coils Coil 572 601 - -
Vian2g00734 660 MobiDBLite consensus disorder prediction 526 566 - -
Vian2g00734 660 MobiDBLite consensus disorder prediction 407 435 - -
Vian2g00734 660 MobiDBLite consensus disorder prediction 379 436 - -
Vian2g00734 660 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 14 658 IPR047139 -
Vian2g00734 660 Gene3D - 389 494 IPR036770 -
Vian2g00734 660 Coils Coil 501 539 - -
Vian2g00734 660 ProSitePatterns Zinc finger C2H2 type domain signature. 82 104 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00734 19 607 C2H2 Transcription Factor Family AT1G01930 51.634 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00734 K26089 - gmx:100527709 1021.54