Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00706 ATGCAAAACTCTACTGAATCTTCTCCAGCTTCCCCCGGGCCGGTGGACCCGGTGCCGTTCCTCCCTCAAAGCCGCCACGTCGCCCGCCGTGTGCCACTACGAACAGCGACGAGGTTCTTCCGACGCGCGAGCGGGCGGCGTCTTATGCTGGGAGAGGCTTCGGTGCGCGTGCGGGAAGCAGCCGCGGCCGAGGTGGAGGAGCGGCAGAGCGAGTGGGCGTACTCGCGGCCGGTGGTGGCGGTGGACGTCCTATGGAACACGGCGTTTCTGGTGATCGGCGCGTCGGTGCTGTGGCGGAGCGCTGCGGAGGAGCCGAGCGTGCCTCTCAGGACATGGATTTTGGGGTATTTGGTGCAGGGAATGATCCACTCTCTCTGCGTCCTGGTTGAGTTCCGAAGGAGAATGACGAGTGGGACCAATTTCAGTTCCAATGTGCCAAACCATGTTGAATGGAGCTTCACTTCTGAAAGTGACCAAGAGTTTTATTATTACGAACCCTCTCTCCAGGGTGATGAAAACTGCATCATAAAATACATAGAGTCGGCAAATACCATGCTTTCATTCATATGGTGGACTGTTGGAGTCTACTGGGTAACTCTTGGTGGCCAGAGTCTGACAACGGATGCACCTCAGCTTTACTGGGTCTCTATCGCATTTCTTTCTTTCGACGTTGTCATTGTACTGATCTGTGTCGCTGTTGCATGCCTTATTGGTATTGCTGTTTGCTGCTGTCTACCATGCATCCTTGCTCTCCTGTACGCAGTGACAGATCAGGAAGGGGCAACGAAGGAAGAGATTGACCAGTTGCCAAAATATAAGTTCAGAATAATAAAAGAAGGTGATATTGAAGAATCTTCAAGAGGAATAATGATCGAATCTGAGAGTGAGACAGCCACAGAACATGTTGTTGCCTTAGAAGATGCAGAATGCTGTATCTGTCTCTCTCCATATGATGATGGTGCTGAAATCAGAGAACTTCCTTGCAACCACCATTTTCATTGCGCATGCATAGACAAATGGCTGCTAATCAATGCTACCTGCCCTCTCTGCAAGCTTGATATTTTGGTTGGTAACCACCATCATGAAGTTTGA 1092 0.5119 MQNSTESSPASPGPVDPVPFLPQSRHVARRVPLRTATRFFRRASGRRLMLGEASVRVREAAAAEVEERQSEWAYSRPVVAVDVLWNTAFLVIGASVLWRSAAEEPSVPLRTWILGYLVQGMIHSLCVLVEFRRRMTSGTNFSSNVPNHVEWSFTSESDQEFYYYEPSLQGDENCIIKYIESANTMLSFIWWTVGVYWVTLGGQSLTTDAPQLYWVSIAFLSFDVVIVLICVAVACLIGIAVCCCLPCILALLYAVTDQEGATKEEIDQLPKYKFRIIKEGDIEESSRGIMIESESETATEHVVALEDAECCICLSPYDDGAEIRELPCNHHFHCACIDKWLLINATCPLCKLDILVGNHHHEV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00706 363 MobiDBLite consensus disorder prediction 1 21 - -
Vian2g00706 363 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Vian2g00706 363 SMART ring_2 310 350 IPR001841 -
Vian2g00706 363 SUPERFAMILY RING/U-box 290 356 - -
Vian2g00706 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 355 IPR013083 -
Vian2g00706 363 Pfam Ring finger domain 309 351 IPR001841 -
Vian2g00706 363 PANTHER TARGET OF ERK KINASE MPK-1 48 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00706 Vian-Chr2 9650104 9653789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00706 7 361 C3H Transcription Factor Family AT1G68070 45.404 9.97e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00706 - - gmx:100795425 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00706 2 9650104 9653789 Vian2g00706 2 9650104 9653789 ECH