Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00692 ATGGTGGAAGATGGTGATGAGGTTGCAGTTGATGCACGTTCCACAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCCGTTGTTCTTGATAAAGCAAGAGAGGCTAAGGGATTTGCCGGTAGATGGAAGATGATCATTGCAAAATTGGAACAGATCCCGTCACGATTATCAGATTTGTCAAGCCATCCGTGCTTCTCAAAAAATGCTTTATGCAAGGAGCAGTTGCAGGCCGTGTCAAAGACGCTTGGGGAAGCGATTGAATTAGCCGAGTTGTGTATGAAGGAAAAATACGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGACTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCATTGGCCGTGTCAAGTTCTGTGGCAGAATCAGATGTTGCAATATACAACAACATAAGGGAATTACTGGCGCGTCTTCAGATCGGGCACTTGGAAGCGAAGCACCAAGCTCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAACGTTTTAGCGGCTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGAATAAGAGAGAAAACGGTTACTGTTATATGCTCGCTTGCAGAATCTGGTAGTTGCGAGAATTGGCTTGTTTCTGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTAGAATCTGGCAGTGCAGTGGGGAAGGAGAAGGCCACGATATCCCTTCAGAGGTTGTCTATGTCAGCCGAAACAGCTCGCGCAATCGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTGTCACAGGCTTCGGCTGCTTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCCGAAGAAGGGATTGTGAGGACCATGATCAATCTTCTTAACTGTGGTATTCTGTTAGGTTCAAAAGAGCATGCTGCAGAATGTTTGCAGAATCTCACTGCAAGCAACGAGAATCTAAGGAGGAGTGTCATATCAGAAGGTGGGGTTAGGAGTCTTCTCGCTTATCTTGACGGTCCGCTTCCTCAAGAATCCGCTGTTGGAGCATTGAGGAATTTGGTCGGATCGGTCCCTGAGACATCCTTGGTCTCTCTCGGATTGGTCCCCCGATTGGTTCACGTGTTAAAGTCGGGATCTTTAGGTGCTCAGCAAGCCGCCGTAGCCGCCATATGCAGAGTTTGCAGCTCGACAGACATGAAGAAAATGGTTGGTGAAGCTGGATGCATCCCTCTCCTTGTGAAAATGCTTGAGGCTAAGTCAAACAGTGCCAGAGAGGTTGCTGCCCAAGCAATTGCAAGCCTGATGGTTGTGTCTCAGAACAGGAGAGAAGTCAAGAAGGATGATAAAAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCAAGTCCTATGAACACTGCAAAAAAATATGCAGTCACATGCCTCGGATCACTTTCTTCGAGTAAGAAATGTAAGAAGCTAATGATTTCGTATGGGGCTATTGGGTATCTCAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTGCATGAACGGTTGGAAAGAGGGAAATTGAAAAGTTTTTTTAGCAAGAAATAG 1680 0.4643 MVEDGDEVAVDARSTEDWLLHAQELVPVVLDKAREAKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVAIYNNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKNVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARAIVGHGGVPPLVELCQIGDSVSQASAACTLKNISAVPEVRQTLSEEGIVRTMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPETSLVSLGLVPRLVHVLKSGSLGAQQAAVAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLMVVSQNRREVKKDDKSVPNLVQLLDPSPMNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLKSFFSKK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00692 559 Pfam Armadillo/beta-catenin-like repeat 430 467 IPR000225 GO:0005515
Vian2g00692 559 Pfam Armadillo/beta-catenin-like repeat 270 306 IPR000225 GO:0005515
Vian2g00692 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 557 - -
Vian2g00692 559 SMART arm_5 349 388 IPR000225 GO:0005515
Vian2g00692 559 SMART arm_5 429 469 IPR000225 GO:0005515
Vian2g00692 559 SMART arm_5 184 224 IPR000225 GO:0005515
Vian2g00692 559 SMART arm_5 266 306 IPR000225 GO:0005515
Vian2g00692 559 SMART arm_5 389 428 IPR000225 GO:0005515
Vian2g00692 559 SMART arm_5 470 512 IPR000225 GO:0005515
Vian2g00692 559 SMART arm_5 307 348 IPR000225 GO:0005515
Vian2g00692 559 Gene3D - 394 539 IPR011989 -
Vian2g00692 559 SUPERFAMILY ARM repeat 156 536 IPR016024 -
Vian2g00692 559 Gene3D - 332 393 IPR011989 -
Vian2g00692 559 Gene3D - 150 331 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00692 Vian-Chr2 9091623 9093302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00692 399 542 U-box Gene Family AT3G54790 29.167 2.85e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00692 - - gmx:100781453 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00692 2 9091623 9093302 Vian2g00692 2 9091623 9093302 ECH