Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00682 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTTTGAAAAAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTGGATGACAGGTTACTAATGATATTGTTATTGACTGTGGAGCGGTTGCGTAAGAATTCTCTATGGAAGCCGTACCTCGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAACTGAGAGGAACAACACTATATCGTGCGACTGACTTGCAGAAGAAAAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGACCCGTGCTTTAAACATTCCAATGCCTCGATCTTATGTATTTCCAGAAATGCAAGATGATCATGACAGTTGCATTCCTGAAGCTGATGAAAAAAGAAACCAGGTTAAAAAATCTAACAGTCTGACCACGAAAGTGGCATGTAACAGTTGCACAGTGACAGGAGAAACTGTTTGGGTGGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTAAAGCCGATAGCAACGTGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTTCCTTTCTCCATGTATCTTATTTTGGCTGCTCAAAGTGACTTGCGAAATGACCAAGAAATTTCTATTAGTTATGGAAATAAGGGAAATGAGGAACTTCTGTATTTGTATGGTTTTGTCATTGATGAGAACATAGATGACTATGTCATGGTCCACTATCCAGCAGAAGCAATGAATACTATTTCCCTTTCAGAGTCCAAAGGACAGCTTCTCGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACACAAAACGTTTCTGGATAATGGGTTTTTTCCGCTAGGGACCCAAATCAGTGGAGAAGATAACAAGGGAAAAGCTGAACAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCTTATGCAAACAAGCTAGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTCTGTGGTGATACTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGAATCTTGAAGAGAGTTCTGGAACAGATGAAAATGACCTTGATTTACTCAGGAAAGCCCTTATTATTGATGACCAGGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGACAAATGACTCTGAGGAGCCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATCGGCGTGGACAGAAACAACTAACAAGGTTATTCCTGCAAGAAGCAGAACATGCTTTGCAGTTATCACTGAATGAAGAAGAGGTGACTTCTTGCTAA 1683 0.4135 MASPEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFFEKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMILLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATDLQKKSLLSLYETKVKDIVKKLLTLDGNSEIEVCFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHDSCIPEADEKRNQVKKSNSLTTKVACNSCTVTGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLILAAQSDLRNDQEISISYGNKGNEELLYLYGFVIDENIDDYVMVHYPAEAMNTISLSESKGQLLEVQNAEMRCLLHKTFLDNGFFPLGTQISGEDNKGKAEQVCNYSWSGQRKMPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEELAGPERERELSDTDVQSAVWEVCGDTGALQLLVDLLRVKMMNLEESSGTDENDLDLLRKALIIDDQEDSKQCTSNLSTKTNDSEEPKLMTRNKWSAIVYRRGQKQLTRLFLQEAEHALQLSLNEEEVTSC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00682 560 CDD SET_LSMT 32 313 - -
Vian2g00682 560 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 489 - -
Vian2g00682 560 Pfam SET domain 81 299 IPR001214 GO:0005515
Vian2g00682 560 SUPERFAMILY SET domain 8 317 IPR046341 -
Vian2g00682 560 Gene3D set domain protein methyltransferase, domain 1 5 313 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00682 8 190 NAC Transcription Factor Family AT3G56570 26.344 2.99e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian2g00682 SET 9.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00682 - - vun:114183365 1080.09