Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g00660 | ATGAACATGGATATGGCTTGTGGTTTACCGCAGTCAAGGGTGTTGCACGGAGGTGTGGGGACGAGTTACAGACACAGATCAGTTGGTCAGTTAGGTTGTTTTGATTTTAGAGGGAGAGGTTTTGGTTGTGTTGGTTTTGACAGCTGGAGAAGTGTTTCAAAATTTCGTGTTAGTGGAGTGAGTGCTTCTGCTTGTTGGAGTAATTCCAGGGTGTTTACAGGTAGGGAGTTTAAATTTTTGAATATTGAGAGAAGTTTGTCTTGTAAGAATAATAATCTTTTTACGGGGTCTAGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTACTGGCAACGGTCGGACTGTTGATTATGTGGAAGGTTCAGGTGAGGATGCAGGATTGGAGTCTGTTTCTAGTGTTGAACCTGATGCACCTTTGGAAGAAGAAGATCAAGCAGGAAGAAAAGAGGGAGGGAGTGAAATAGGATCAGAGGAACCAAGTGTGGATGAATTGAAAGAACTATTGCAAAAGGCCAGGAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCTGTGATTTCTTGGAATGCTCTTAATTCTACCCTTGACACCATCAAAGATCTAGCTAATGAAGAGCTTATGGCCAAAGAAGCTGTCCAAACTGCAACAATGGCTCTTTCATTAGCTGAGGCAAGACTTCAAGTAGCCATAGAATCTTTGGAGCCTACAAAAGAAGTTCCTGATTCAACACAAGGGTCTAATGAGAGCAATGGTGATAACGACATGGAGGAACATGAGAAAGCTATTTTGTTTGCTGAAGCAGATATCAAGGAATGCCAGGCTAACTTAGCCAATTGTGAGGCAGAGCTGAGGCGCTTGCAAAATAGGAAGGAAGAGTTGGAGAAGGAAGTGAGCAAATTGCAAGAAATTGCTGAAAATGCTCAGCTGAATGCTGTGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTGGCTGAGCAAGCTGTTGCCTTTGAACTTGAGGCAACAAAACATGTAAATGATGCAGAGATTGCCTTACAACGAGCAGATAAGTCTAATTCTAGTTCAAATGCTGATACGATAGAAACTACCCAAGCACCCGATGTTGAGGCTATTCTTGAGGAGGAAAAAGTGGTTAACTGTTTTTCTGGTGATGTCACTGTTGAAAGAGACAGAGAATTGTCAATTGATGATGAATATTTGGTTGCGAATTTATCACCTGAAACACTATCTGATAAAGCCAACCAAATTTTGGAAGATAAAACACCGTCTGATTATTTAAGTGATAATGAGAATGCCATACAAGCAAAAAAGCAGGAAACACAGAAAGATTTAACCAAAGATAGTTCACCTTTTGCTCCCAAGGCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCGTCATTCTTTTCTTTTACCGAAGATGGGACTGAGTTCACACCAGCATCAGTCTTTCAGGGCCTTATAATATCTGTACAGAAGCAGTTGCCGAAGCTGATTTTTGGGCTCTTGTTAATGGGAGCAGGGGTTACCTTCTTTGCTAATAAAGTGGATAGGAATGCTCAGCTGCTTCCCCAGGCAGACGTTATCATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCGCTTGTTAGACACCTACAGAAACTGCCCAAGAAAATCAAGAAAATCATTGCGTCTTTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGCTATTACTTGCAAGTGTTATATTTGTGCCAATATTCCAGAAAATTCCTGGAGGCAGTCCTGTTCTTGGCTATTTGGCCGCTGGTATCTTGATTGGGCCATATGGTCTCTCTATCATTCGTCACGTACATGGCACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGCCTAGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTCTTGGCAACTGCTGTAGCTATTGGTTTGGTGGTTCATTTTATCTGTGGCCAACCTGGTCCTGCTGCTATTGTTGTTGGGAATGGCCTTGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGCCGAGCTACTTTTTCTGTGTTACTCTTTCAGGATCTGGCTGTTGTGGTGTTGCTAATTCTCATACCTCTTATTTCTCCCAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGAATGGCTGCTGTTAAGGCAGCAGTTGCAATCACTGCCATAATTGCAGGGGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCTGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACGGCCAGGGCTGGACTTTCCATGGCATTAGGTGCCTTTTTGGCTGGTTTACTGCTGGCAGAAACTGAATTTTCGTTACAGGTTGAATCTGACATTGCTCCATATCGTGGCCTTCTTTTAGGGCTATTCTTTATGACGGTTGGAATGTCAATAGATCCAAAACTTCTTGTATCAAACTTCCCAATTATCGGAGTTACACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATGTTTGGGATTTCCTTCATTTCTGCCATCAGAGCTGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCATTTGTGGCTTTTGGTGATGCCGTTAATCAGGGCATAATGTCTTCCCAGCTATCATCTTTGCTTTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCAGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGAATGATGTTAGAAGACTATTACCTGAAGAAAGTGAGACAGATGATCTGCAAGATCATATTATTATTTGTGGATTTGGACGAGTGGGCCAGATCATTGCCCAACTTCTTTCTGAGCGTCTTATTCCGTTCGTCGCACTAGATGTAAGGAGTGATAGAGTTGCAGTTGGCCGTGGTCTGGGTCTGCCTGTGTATTTTGGGGATGCTGGTAGTAGAGAGGTCTTACATAAACTTGGAGCTGAAAGGGCATGTGCTGCAGCAATAACACTCGATACACCTGGTGCAAATTATAGAACAGTCTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACCTTTGTCCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCCACTGCTGTCGTACCAGAGACTTTGGAACCAAGTCTTCAACTTGCAGCTGCTCTGCTTTCTCAGGCCAAACTCCCCACGACGGAGATTGCAGCCACTATAAATGAATTCAGAACTCGACATCTGGCTGAGCTCTCAGAGCTGTGTGAAGCAAGTGGAAATTCTCTGGGTTACGGATATAATAATAATAATAAAATTGCGGGAAAACCAAAATCCCAATCAACAGATTCATTAGATGAGACCCCTGTTTCTGAAGGCACTCTGGCAATATGA | 3618 | 0.4279 | MNMDMACGLPQSRVLHGGVGTSYRHRSVGQLGCFDFRGRGFGCVGFDSWRSVSKFRVSGVSASACWSNSRVFTGREFKFLNIERSLSCKNNNLFTGSRVIWSKCQGNDSLAYVTGNGRTVDYVEGSGEDAGLESVSSVEPDAPLEEEDQAGRKEGGSEIGSEEPSVDELKELLQKARKELEVAQINSTMFEEKVKKISETAISLHDEAVISWNALNSTLDTIKDLANEELMAKEAVQTATMALSLAEARLQVAIESLEPTKEVPDSTQGSNESNGDNDMEEHEKAILFAEADIKECQANLANCEAELRRLQNRKEELEKEVSKLQEIAENAQLNAVKAEEDVTNIMLLAEQAVAFELEATKHVNDAEIALQRADKSNSSSNADTIETTQAPDVEAILEEEKVVNCFSGDVTVERDRELSIDDEYLVANLSPETLSDKANQILEDKTPSDYLSDNENAIQAKKQETQKDLTKDSSPFAPKALLKKSSRFFSASFFSFTEDGTEFTPASVFQGLIISVQKQLPKLIFGLLLMGAGVTFFANKVDRNAQLLPQADVIMTSVEEVSSSAKPLVRHLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAIGLVVHFICGQPGPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPIIGVTLGLLICGKTILVSLMGRMFGISFISAIRAGLLLAPGGEFAFVAFGDAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRRLLPEESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRGLGLPVYFGDAGSREVLHKLGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAALLSQAKLPTTEIAATINEFRTRHLAELSELCEASGNSLGYGYNNNNKIAGKPKSQSTDSLDETPVSEGTLAI | 1205 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g00660 | 1205 | MobiDBLite | consensus disorder prediction | 1182 | 1205 | - | - | |
Vian2g00660 | 1205 | FunFam | K(+) efflux antiporter 2 chloroplastic | 1002 | 1166 | - | - | |
Vian2g00660 | 1205 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1003 | 1144 | IPR036291 | - | |
Vian2g00660 | 1205 | FunFam | K(+) efflux antiporter 2 chloroplastic | 594 | 980 | - | - | |
Vian2g00660 | 1205 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 200 | 1178 | - | - | |
Vian2g00660 | 1205 | Gene3D | - | 1002 | 1166 | - | - | |
Vian2g00660 | 1205 | ProSiteProfiles | RCK N-terminal domain profile. | 1006 | 1128 | IPR003148 | GO:0006813 | |
Vian2g00660 | 1205 | MobiDBLite | consensus disorder prediction | 257 | 278 | - | - | |
Vian2g00660 | 1205 | Coils | Coil | 166 | 193 | - | - | |
Vian2g00660 | 1205 | Pfam | Sodium/hydrogen exchanger family | 604 | 974 | IPR006153 | GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600 | |
Vian2g00660 | 1205 | MobiDBLite | consensus disorder prediction | 1182 | 1197 | - | - | |
Vian2g00660 | 1205 | Coils | Coil | 279 | 341 | - | - | |
Vian2g00660 | 1205 | MobiDBLite | consensus disorder prediction | 145 | 167 | - | - | |
Vian2g00660 | 1205 | Gene3D | - | 594 | 982 | IPR038770 | - | |
Vian2g00660 | 1205 | MobiDBLite | consensus disorder prediction | 128 | 167 | - | - | |
Vian2g00660 | 1205 | Pfam | TrkA-N domain | 1007 | 1120 | IPR003148 | GO:0006813 | |
Vian2g00660 | 1205 | NCBIfam | monovalent cation:proton antiporter-2 (CPA2) family protein | 605 | 885 | IPR004771 | GO:0006812|GO:0008324|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g00660 | Vian-Chr2 | 8677515 | 8698338 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g00660 | 3 | 1205 | Inorganic Solute Cotransporters | AT4G00630 | 64.806 | 0.0 | 1387 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g00660 | K03455 | - | gmx:100798822 | 1917.12 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian2g00660 | 2 | 8677515 | 8698338 | Vian2g00660 | 2 | 8677515 | 8698338 | ECH | |
Vian2g00660 | 2 | 8677515 | 8698338 | Vian9g00704 | 9 | 9016793 | 9031836 | PCT |