Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00629 ATGAATACAACTGATCTTGAGCAGCTAGAGAATCAACTAGAGGTAGCACTGAAGAATATTAGGTCAACAAAGACTCAATTCATGCTTGACCAGCTTGATGATCTTCACCACCGGGAAACATTCCTTGTTGAAACTAACAATGTGTTAAGGAGTAAGATTGGTGGTGATGATGCAAACGTTGGAGCTTCATCCTTGAGTATGCATGGATTCGCTTCTGGGTGGATGCTTTGA 231 0.4156 MNTTDLEQLENQLEVALKNIRSTKTQFMLDQLDDLHHRETFLVETNNVLRSKIGGDDANVGASSLSMHGFASGWML 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00629 76 Coils Coil 6 26 - -
Vian2g00629 76 Pfam K-box region 1 53 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vian2g00629 76 ProSiteProfiles K-box domain profile. 1 59 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00629 Vian-Chr2 7993290 7993791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00629 1 67 MADS-box Gene Family AT5G15800 49.254 7.40e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00629 K09264 K09260 gmx:100797819 114.005