Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00626 ATGTCTATGTTAGTGAAAATCGTTGTGTTGTTGTGCATGCTGACATTAGCATCAGCATGGGTAGCAGACCCCGCTAGTGTGGAAATTACGAATCATTTGGAGGAAAATGAAATTATAAATGTTCACTGCAAATCAAAAGATGATGATCTTGGATTCTACCGTCTCTCTATTAACCAAAGCTACAAATTTAGTTTTGGAACTAACTTTTTTCAGAATACATTATTCTTTTGTTCGGTTCAATGGGGAAATGCTGCTTTGTTGTATTTTGATGCATATAAGCAAACTAGAGATAACAAGATATGTACAGACTGTCATTGGTTTATACACAAAGAGGGACCATGTAGAGAAGAATCAGGCATTCGCAAATGCTATGAATGGCACTGA 384 0.362 MSMLVKIVVLLCMLTLASAWVADPASVEITNHLEENEIINVHCKSKDDDLGFYRLSINQSYKFSFGTNFFQNTLFFCSVQWGNAALLYFDAYKQTRDNKICTDCHWFIHKEGPCREESGIRKCYEWH 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00626 127 Pfam Plant self-incompatibility protein S1 27 126 IPR010264 -
Vian2g00626 127 PANTHER - 24 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00626 Vian-Chr2 7921845 7922228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00626 15 115 Carbohydrate Esterase AT3G16970 39.048 1.18e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00626 - - var:108323628 178.333