Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00623 ATGTCTGTGTTCACGAAAATCGTTATATTGTTGTGCATGCTCACATCGGCATGGGCAAAAAGAACTACTGTGGAGATCACAAATAGTTTGGAGGGAAAAGAAAATCTAAACATTCACTGCAAATCAAAAGATGATGATCTTGGATTCCACCTTCTCCCTATTAACCAAAGCTTCCAATGGAGTTTTGGACCTCACTTTCTTGGGAAAACACTATACTTTTGTTCGTTTCAATGGGGAAATAGTCCTTTGTTGTATTTTGATGCATACGATGAACCTAGGGATATCGATATATGTTCAAACTGCCATTGGTATATTAAGAAAGATGGACCATGTAGATACGAGGAACCAACCTATCGCAAATGTTATAAATGGAACTGA 378 0.3757 MSVFTKIVILLCMLTSAWAKRTTVEITNSLEGKENLNIHCKSKDDDLGFHLLPINQSFQWSFGPHFLGKTLYFCSFQWGNSPLLYFDAYDEPRDIDICSNCHWYIKKDGPCRYEEPTYRKCYKWN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00623 125 PANTHER - 19 115 IPR010264 -
Vian2g00623 125 Pfam Plant self-incompatibility protein S1 23 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00623 Vian-Chr2 7741338 7741715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00623 21 125 Carbohydrate Esterase AT3G16970 41.441 1.88e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00623 - - vun:114183032 171.014