Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00619 ATGGAAGCAGAGAGATACACCAGTCAGCGGTGGCGTCCTACCGAAGATCAGACCCAGATGATGACCAGAATCTACAACTTTGGGGTCACACACCCAAGCAGAGCGCAAGTTGTCGAGATCACGTCTCGACTAAGGATCTTCGGAGATGCTAGCGAATACAACGTGCACTGCTGGTTCAACAATCACGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGTTTTCACAACTGCCGCTATATATGTACGATTATGACTGGGTGATTATGAGGGCACCGAGGCTGCTGAATCTGTTTCCCGTTCCGATCATCATCGACGACGATAGGGACGTACGACAAATCCCTCCACCCATGCTTCTCACATTCCGAACCAGAGCTCCCTCAACGGAGCTCTCCCTTAGACCTCCACAACCAGCTCGAGAATTCTTTCGCTGA 450 0.5244 MEAERYTSQRWRPTEDQTQMMTRIYNFGVTHPSRAQVVEITSRLRIFGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYDYDWVIMRAPRLLNLFPVPIIIDDDRDVRQIPPPMLLTFRTRAPSTELSLRPPQPAREFFR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00619 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian2g00619 149 Gene3D - 8 73 - -
Vian2g00619 149 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 72 IPR044559 GO:0003700
Vian2g00619 149 Pfam Homeodomain 8 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00619 Vian-Chr2 7574905 7575441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00619 1 72 Wox Gene Family AT5G59340 38.889 5.64e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian2g00619 Homeodomain 2.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00619 - K08052 vum:124821070 276.944