Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00615 ATGGCAAAGAGGTCACAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCTCGATTTACTCGGAAGTTGATAGCAGATAAGAGGCACGGAAGCAAGCATGCTTTTGGTGCGCCACTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGGTGAAAACTATGAAGGCAATTTTGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATCACTGACCAAGATGAAATAACGGATCAAGATAACGTGGAAGTGGAATCAAAGCAATCCAGATTAGGGCGTGATGAACCCCAGAAGACAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAACCGTGATTTGAAATCAGATGCAACCTTGAAATCAGAGTTTTCACATAAGAAGCATTCAAGGGAACAGTCAAAAGATACTATAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGTTTGACAATGATGGCAAAATTGACGCGCAGTCAAACCAAAAGAATGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGAGATTGAATGGGAAAGATCTGCATGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTATCTTAAACTTCTACAAGACCCAAATTCGCACTTGCTGAAATACATTCAGGAGTTGGAAAATGCTCAAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGCCTCCAACTGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACCAACCGTAAGCATCTTAACTTTTTCAGGAAAAGGGGAAAGTCTCAATCAAAAGATCTGACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACTGGCATTCAAATTTCTGAAAGTGAAAGCAACCTTGCCTCAATGCTAGATTCTCGTGATGTTTCCAATTACAAAGGTCCTTCAGTGAGAGTTGGTTCACATTTTTCTCTTACAGAGATAAAAAGAAAATTGAAACATGCCATGGGAAAGGAGAGGCATGGAAACCCTGAAGTAATCCCACGAAAGCTCCCTGTTGAACGTCAAAATAAGTTGGCAAGAGGCAAATGCAAAGATAATACTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAGATTGCTAGACCAATGTTTGATGTCATGAAGGGAAACAAGACTGATACACTGAAGGACTCTGAAATGATCGTAGAACAAGAAAGTGGTATTCCCAAGCTTAGTGCTTCTAGCTTATATGTTGAGGCAAGGAAACATCTGTGTGAGATGTTAGATAATGGTGATGAAAACACGAACATTTCAAGCAGGCAGATTCCCAAAACCCTTGGGAGAATACTTTCTTTTCCCGAGTACAACTTTTCACCTGTAGAAAGTCCTGGAAGGGATTTTGAGCATCATTCTGTGACTGCACAGGCAATATCTTCTCCCTCTGGAAAAACTAGGGAAGTTAGTGAGGATATTTCCTCCCCAGAACCAGCAACCTCAGTTGGTTTTCCAGCTCAGGAAACTAACAATTCAGAAGAGAAGTCATGCGTTTGTGATGGAATCTCTAATAATAAAGTACAAGAAATTAAGCCAGTGTCAAATTTCTCCAGTGATGTTGGTCCTGTTGATACATTTGAAGTCTGTTGTCCTATTAGAGATGTGACAGTCACTGAAGACAATGTTGAACCTGCAGAAGAGAAAAATGGGTTGGAATCAGATCTGAATGGCTTCATCGTAGGACAGGACCAAAAAATTGATATCTCAGAAACTCCTGATGGTGCAAAATGTTCTGGATGTTTGAATCAGGATGAGGATATAACAGAAGAGAACCAACTATCATCTCTACCGACATCTCCTCACTCTTTGATCTCTAAGAAAAATGAAGAGGTGGAATGCGGTATAGATTTATCTGGGGGACCGAGTCCTGTATCTGTTCTTGATACATCATTTTCAGATGATGACTCTGGACACTCCAGATGTCAACCTGTTAACTTACAAGTACAACCTCTACAAATTCAATTTGAAGAACACGAGTCTTCACCAGCTGAAGAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATATATGACTACATCAAAGTTGTCTTGCATGCCTCTGGTTTGACAAGAGATCAGTTGTTGGTGAAATGCCTTACCTCTGACAAAATACTAGATCCTTCCCTCTTTGATCAGGTAGAGTTCTTCTCCAACCTGCTTTGCCACGACCAGAAGCTCCTATTTGAATCTATCAATGAGGTCCTGATGGAGGTTTGTCAGCATTATTTTGGGGTCTCACCTGGTGTCTCATTAGCAAACCCTTGCATGAGGGCAGCACCAAGTATGAAAAGGCTTACTTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACGCACTTTAGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAACAATTGGTTTTGAAATGGGGGAGGCCATTCTTACTGAACTGATGGAAGACACAATTTTGAGTCTTGTGAGTGAAAGTTCAGTAAGTATTTAA 2760 0.3989 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAFGAPLTKNKFEVLSNLGENYEGNFDRGESKRLTLTTDAEKLSVKKLIEEEMITDQDEITDQDNVEVESKQSRLGRDEPQKTDSKRKKKSRKKNRDLKSDATLKSEFSHKKHSREQSKDTIDLDKIMDDFCHVEAACSMMFDNDGKIDAQSNQKNVMSENLANAIHEFVNQMRLNGKDLHEDGQFLSSRELMEALQVISSDKQLYLKLLQDPNSHLLKYIQELENAQGRDGKECSSLTASNCSELELVSLKQTRENTNRKHLNFFRKRGKSQSKDLTNENGKTEFSNRIVILKPALTGIQISESESNLASMLDSRDVSNYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQNKLARGKCKDNTGMRSPNKDHFFIEKIARPMFDVMKGNKTDTLKDSEMIVEQESGIPKLSASSLYVEARKHLCEMLDNGDENTNISSRQIPKTLGRILSFPEYNFSPVESPGRDFEHHSVTAQAISSPSGKTREVSEDISSPEPATSVGFPAQETNNSEEKSCVCDGISNNKVQEIKPVSNFSSDVGPVDTFEVCCPIRDVTVTEDNVEPAEEKNGLESDLNGFIVGQDQKIDISETPDGAKCSGCLNQDEDITEENQLSSLPTSPHSLISKKNEEVECGIDLSGGPSPVSVLDTSFSDDDSGHSRCQPVNLQVQPLQIQFEEHESSPAEEFDTGKYSFGENELIYDYIKVVLHASGLTRDQLLVKCLTSDKILDPSLFDQVEFFSNLLCHDQKLLFESINEVLMEVCQHYFGVSPGVSLANPCMRAAPSMKRLTFKVWEGVCWHVLPLPPPRTLEQIVRKDMARRGTWMDLELDAETIGFEMGEAILTELMEDTILSLVSESSVSI 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00615 919 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 911 - -
Vian2g00615 919 MobiDBLite consensus disorder prediction 103 167 - -
Vian2g00615 919 MobiDBLite consensus disorder prediction 111 132 - -
Vian2g00615 919 Pfam Domain of unknown function (DUF4378) 759 906 IPR025486 -
Vian2g00615 919 Pfam Protein of unknown function (DUF3741) 218 262 IPR022212 -
Vian2g00615 919 MobiDBLite consensus disorder prediction 143 167 - -
Vian2g00615 919 MobiDBLite consensus disorder prediction 529 566 - -
Vian2g00615 919 MobiDBLite consensus disorder prediction 532 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00615 Vian-Chr2 7518758 7522968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00615 1 894 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.072 2.72e-95 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00615 - - gmx:100783243 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00615 2 7518758 7522968 Vian2g00615 2 7518758 7522968 ECH
Vian2g00615 2 7518758 7522968 Vian9g00668 9 8422850 8426726 PCT