Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00564 ATGGAAAGCCATGATCTACCACCCCGAAACAACCCTTTTCTGTTCAACCCTTTGGAACCTCAAGAGCAAGGGCTATGCGACTTTGACTCATGGGGTAACCTTTTCTCTGCCCAGAACAGCTTGTTGTTGCTTAATGGTGATGCCAAGGAAACTATTCAACGTGCTTCTTCTTCCTCTTTAATGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGTAGCAAGGAGAAAAGGAAAGGTGTGAGAGTGAAGAAAACAACACGAGTGCCGAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATGTTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAATCTAAGTTACTACCGGTGCACGCACCACACGTGCAATGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTGATGGAAACTCTAACCCCTCTGCTGAAGCAAATACAGTTTCTTGCTAG 519 0.4509 MESHDLPPRNNPFLFNPLEPQEQGLCDFDSWGNLFSAQNSLLLLNGDAKETIQRASSSSLMAQNKVVCEEEKGSKEKRKGVRVKKTTRVPRFAFQTRSADDVLDDGYRWRKYGQKSKLLPVHAPHVQCEETSAKAVKRHKHCGDNVRGNSQPSMREADGNSNPSAEANTVSC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00564 172 Gene3D WRKY domain 90 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian2g00564 172 ProSiteProfiles WRKY domain profile. 98 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g00564 172 MobiDBLite consensus disorder prediction 146 172 - -
Vian2g00564 172 SUPERFAMILY WRKY DNA-binding domain 96 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian2g00564 172 MobiDBLite consensus disorder prediction 140 172 - -
Vian2g00564 172 SMART WRKY_cls 103 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian2g00564 172 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 116 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00564 Vian-Chr2 6847811 6848455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00564 76 116 WRKY Transcription Factor Family AT5G41570 70.732 3.34e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00564 - - gmx:100127398 142.124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00564 2 6847811 6848455 Vian9g00612 9 7307012 7307374 PCT