Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g00564 | ATGGAAAGCCATGATCTACCACCCCGAAACAACCCTTTTCTGTTCAACCCTTTGGAACCTCAAGAGCAAGGGCTATGCGACTTTGACTCATGGGGTAACCTTTTCTCTGCCCAGAACAGCTTGTTGTTGCTTAATGGTGATGCCAAGGAAACTATTCAACGTGCTTCTTCTTCCTCTTTAATGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGTAGCAAGGAGAAAAGGAAAGGTGTGAGAGTGAAGAAAACAACACGAGTGCCGAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATGTTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAATCTAAGTTACTACCGGTGCACGCACCACACGTGCAATGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTGATGGAAACTCTAACCCCTCTGCTGAAGCAAATACAGTTTCTTGCTAG | 519 | 0.4509 | MESHDLPPRNNPFLFNPLEPQEQGLCDFDSWGNLFSAQNSLLLLNGDAKETIQRASSSSLMAQNKVVCEEEKGSKEKRKGVRVKKTTRVPRFAFQTRSADDVLDDGYRWRKYGQKSKLLPVHAPHVQCEETSAKAVKRHKHCGDNVRGNSQPSMREADGNSNPSAEANTVSC | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g00564 | 172 | Gene3D | WRKY domain | 90 | 149 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g00564 | 172 | ProSiteProfiles | WRKY domain profile. | 98 | 139 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g00564 | 172 | MobiDBLite | consensus disorder prediction | 146 | 172 | - | - | |
Vian2g00564 | 172 | SUPERFAMILY | WRKY DNA-binding domain | 96 | 143 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g00564 | 172 | MobiDBLite | consensus disorder prediction | 140 | 172 | - | - | |
Vian2g00564 | 172 | SMART | WRKY_cls | 103 | 143 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g00564 | 172 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 57 | 116 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g00564 | Vian-Chr2 | 6847811 | 6848455 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g00564 | 76 | 116 | WRKY Transcription Factor Family | AT5G41570 | 70.732 | 3.34e-14 | 65.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g00564 | - | - | gmx:100127398 | 142.124 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian2g00564 | 2 | 6847811 | 6848455 | Vian9g00612 | 9 | 7307012 | 7307374 | PCT |