Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00553 ATGAGGGAGCCAATGGCTAACTTTGTGATTCCACTTCCTTTCATGCTCTTCATTACTCATTGGTTTCTGTTGGCTCATCATGGCAGTGCTGCAGAGAGTTCCACATACATAGTACACATGGACAGATCCCTTTTTCCCGCTGCCTTTTCAACGCATCATGATTGGTTTGAATCCTCCGTTCAGTCCATAAAATCAGCAATGCCTGGTCACTCATTCAAGAAATCACAGAAACAGATAGTGTATTCTTATAACCATGCCATGTATGGTTTTAGTGCAGTGCTAACCTCAGAAGAGTTAGAGGCTCTCAAGAACTCTCGTGGTTTTGTTGCAGCATATCCAGACAGAAATGTCACCATAGACACCACTCACACTTTTGAGTTTCTCTCCCTAGCCTCTTCCAGTGGCCTCTGGCACGCTTCCAATTTGGGGGAGGATGTCATTGTGGGTGTTATTGACTCTGGTGTGTGGCCTGAGAGTGAAAGCTTCAAAGATGATGGCATGACCAAGAAAATTCCAAGTAAATGGAAAGGAACCTGTCAGGAAGGGCAAGACTTCAACACTTCCATGTGCAACTTCAAACTGATCGGAGCCAGATATTTCAACAAAGGAGTGATTGCTGCAAAACCCAAGGTTAGAATCACTATGAACTCAGCCAGAGATACAGAGGGTCATGGAACTCACACATCTTCCACAGTTGCTGGCAACTACGTCAGTGGAGCCTCTTACTTTGGCTATGCCAAAGGGGTGGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGAAGAGGGTCGTTACTCCTCTGATGTTTTGGCTGGAATGGACCAAGCCATTGCTGATGGAGTTGATGTCATTTCCATCTCTATGGGGTTTGATGGTGTTCCACTTTATGAGGATCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGTTGGTTTCATCCTCTGCAGGTAACAATGGTCCTGATCTTGGTACTTTGCACAATGGAATCCCCTGGCTTCTGACTGTGGCTGCAGGTACCATTGACCGCACATTTGGTTCTCTAGTTCTTGGAAATGGCCGAACCATTATTGGTTCGACCGTGTTTCCAGCAAATGCCTTGGTGGAAAATCTTCCACTTGTCTACTATAAGAATATATCAGCATGTAACTCAGTCAAGTTGTTATCGAAACTGAGAACAGATGCGATCATTGTATGTGACTTGGTTCCAGACACTAAGTTAATGTACAAGCAAATGTCGGTTGTTAATGAAGCTAGTTTGTCAGGGGCAGTGTTTTTTCTTGATGGTCCTTTGTTAAATTACTCAGGAATTGGTAGCTTTCCAAGTATTGTAATCAGTGCGAAGGATGCACCAACTGTGATCAAGTATGCAAAAAGTCATAAGAATCCAACAGCCAGTATCAAATTTCAGCAAACATTTGTTGGAATGAAGCCAGCACCAGCTCTTGCTGGTTACTCTTCAAGAGGTCCTTCACCAAACTACCCTGGGGTCTTGAAGCCTGACATAATGGCACCTGGCTCTAATGTCCTTGCTGCTTTCATTCCTGATTCTCCAGCAGCTGAAATTGGCGACAATGTGTACTTACCTAGTGACTACAATTTGCTGTCTGGAACATCCATGGCCTGTCCTCATGCTTCTGGTGTTGCTGCTCTTCTGAAAGCTGCACACCCTGAATGGAGTGCTGCTGCTATAAGGTCTGCAATAGTAACCACAGCTAGTCCTCTAGATAATACGCAAAATCCAATTAGAGACTATGGCTATCCTTCTCAATATGCTTCTCCTCTTGCCATGGGAGCTGGTCAAATTGACCCTAACAAAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTATGTTGATCTGCTTTGTGCTTCGAATTACACAATAAAGCAAATCTTAGCCATTACAAGATCATCATCCTACAATTGCGCAAAACCATCTTTTGATCTTAACTACCCTTCATTTATAGCCATCTATAACAACAAAACAATGTCAGTTGTCCACAAATTTAGGAGGACAGTGACCAATGTTGGAGCTGGTGCTGCCATATACAGAGCCAAGGTGACAGAACCTAAGGGCTCTGTGGTGACAGTGTCCCCTGAGACTTTGTCATTCAGATACAAAAATGAGAAGCTGAGCTACAGTGTTGTAATAAAGTACAACAAGTACAAGAAGGAAGATATCTCTTATGGGGATCTTATTTGGATGGAAGATGGTGGAGCACACAGTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGGAATTTTGTATGAGTTTTCCTTCTCCTTGCCATGA 2328 0.4403 MREPMANFVIPLPFMLFITHWFLLAHHGSAAESSTYIVHMDRSLFPAAFSTHHDWFESSVQSIKSAMPGHSFKKSQKQIVYSYNHAMYGFSAVLTSEELEALKNSRGFVAAYPDRNVTIDTTHTFEFLSLASSSGLWHASNLGEDVIVGVIDSGVWPESESFKDDGMTKKIPSKWKGTCQEGQDFNTSMCNFKLIGARYFNKGVIAAKPKVRITMNSARDTEGHGTHTSSTVAGNYVSGASYFGYAKGVARGIAPRARLAMYKVLWEEGRYSSDVLAGMDQAIADGVDVISISMGFDGVPLYEDPIAIASFAAMEKGVLVSSSAGNNGPDLGTLHNGIPWLLTVAAGTIDRTFGSLVLGNGRTIIGSTVFPANALVENLPLVYYKNISACNSVKLLSKLRTDAIIVCDLVPDTKLMYKQMSVVNEASLSGAVFFLDGPLLNYSGIGSFPSIVISAKDAPTVIKYAKSHKNPTASIKFQQTFVGMKPAPALAGYSSRGPSPNYPGVLKPDIMAPGSNVLAAFIPDSPAAEIGDNVYLPSDYNLLSGTSMACPHASGVAALLKAAHPEWSAAAIRSAIVTTASPLDNTQNPIRDYGYPSQYASPLAMGAGQIDPNKALDPGLIYDATPQDYVDLLCASNYTIKQILAITRSSSYNCAKPSFDLNYPSFIAIYNNKTMSVVHKFRRTVTNVGAGAAIYRAKVTEPKGSVVTVSPETLSFRYKNEKLSYSVVIKYNKYKKEDISYGDLIWMEDGGAHSVRSPIVVAPSGILYEFSFSLP 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00553 775 CDD Peptidases_S8_3 117 581 IPR034197 -
Vian2g00553 775 Gene3D - 350 482 - -
Vian2g00553 775 Gene3D - 633 763 - -
Vian2g00553 775 Pfam Subtilase family 143 592 IPR000209 GO:0006508|GO:0008236
Vian2g00553 775 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Vian2g00553 775 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Vian2g00553 775 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Vian2g00553 775 Pfam Peptidase inhibitor I9 35 119 IPR010259 -
Vian2g00553 775 Gene3D Peptidase S8/S53 domain 145 629 IPR036852 GO:0004252|GO:0006508
Vian2g00553 775 CDD PA_subtilisin_like 355 475 - -
Vian2g00553 775 FunFam Subtilisin-like protease SBT1.9 25 120 - -
Vian2g00553 775 ProSiteProfiles Serine proteases, subtilase domain profile. 122 616 - -
Vian2g00553 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 761 IPR045051 -
Vian2g00553 775 SUPERFAMILY Subtilisin-like 121 620 IPR036852 GO:0004252|GO:0006508
Vian2g00553 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Vian2g00553 775 Pfam Fibronectin type-III domain 660 761 IPR041469 -
Vian2g00553 775 FunFam Subtilisin-like protease SBT1.5 145 359 - -
Vian2g00553 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 119 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00553 Vian-Chr2 6718503 6720830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00553 31 764 Subtilisin-like Serine Gene Family AT5G67090 44.106 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00553 - - var:108328904 1337.78