Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00524 ATGAGCTCGAAGGAGAGACCCACTCTTGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCCCTGGACCCTGCAGCATTCTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTATTGCTAAGAGCATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGCAAGCTTCCTAAACCAACAGAAAACCTCTGTTCTCTCATTGTTGATTTCAGTTGTTTTCACTGGGGGTCGTACACAACCTGGAACTACCAAGCCTGATGAAGGGGACCGCCATCCTTACTCCATAATAGAGTGTGAGCCTAAGCGTGAAGTCATCCTACCATCTGTAATCTATATACAAAAGATTTTGAGGCGAAGGCCATTTCTCATCAAGAACCTTGAAAATGTCATGCGAAGGTTCCTCCAGTCATTGGAGCTTTTCGAGGAAAATGAGAGGAAGAAGTTGGCAATCTTCACAGCTCTTGCATTCTCCCAGAAGCTGTCTGGTCTCCCACCAGAAACTGTTCTCCAACCACTGCTTAAAGATAACCTTGTGGCCAAAGGGCTAGTTCTGTCATTTATGACTGACTTCTTTAAGGAGTATCTGATTGACAATAGCCTTGATGATCTTATTTCAATTCTGAAACGGGGAAAAGTAGAGGATAATCTTTTGGACTTTTTCCCCCCTACAAAAAGATCCAATGAAGCTTTCTCTGAGCATTTCAGCAAGGAAGGACTGGTGGCCTTGGTTGAATATAATGAAAAGAAAATTTTCGAGGTGAAATTGAAGGAAATGAAGGCTGCTTTAACAACACAAATAACAGAGGAGGCTGATACCTCTGAAGTCATTGAGACAGTGAAGTTGCGGGTTAGGGATGCTAAATTGCCAGACATTGAGGTGGTGCGGGTAGTGTGGGATGTTTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAACGCAGCCCTCCGACAGCTGTTCCCTGAGATTGTTAGATCTCTCTATGACCAGGATGTACTGGCTGAAGATACAATTCTTCATTGGTTCCGAAAAGGAACAAACCCTAAGGGCAGGCAAACCTTTGTGAAGGCGCTGGAACCCTTTGTTAATTGGCTGGAGGAGGCTGAAGAGGAGGAGTAA 1176 0.4464 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKSIESSDLNFSRYGDTFFEASFLNQQKTSVLSLLISVVFTGGRTQPGTTKPDEGDRHPYSIIECEPKREVILPSVIYIQKILRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVLQPLLKDNLVAKGLVLSFMTDFFKEYLIDNSLDDLISILKRGKVEDNLLDFFPPTKRSNEAFSEHFSKEGLVALVEYNEKKIFEVKLKEMKAALTTQITEEADTSEVIETVKLRVRDAKLPDIEVVRVVWDVLMDAVQWSGKNQQQNANAALRQLFPEIVRSLYDQDVLAEDTILHWFRKGTNPKGRQTFVKALEPFVNWLEEAEEEE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00524 391 ProSiteProfiles W2 domain profile. 228 391 IPR003307 GO:0005515
Vian2g00524 391 Pfam eIF4-gamma/eIF5/eIF2-epsilon 332 391 IPR003307 GO:0005515
Vian2g00524 391 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 336 391 - -
Vian2g00524 391 Gene3D - 326 391 - -
Vian2g00524 391 SMART 542_3 305 390 IPR003307 GO:0005515
Vian2g00524 391 Coils Coil 138 158 - -
Vian2g00524 391 SUPERFAMILY ARM repeat 269 388 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00524 329 387 Eukaryotic Initiation Factors Gene Family AT2G34970 38.333 4.99e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00524 - - gmx:100782537 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00524 2 6342508 6346653 Vian2g00524 2 6342508 6346653 ECH