Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00522 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCGCCCCACTTCACCCTCTACATCTTTTAGGAAGCGCAAGAGCAACGCCAAGAAGAGGCTTGGATCAAGAGCTTCTTCCTTTGAGTATTGGAGGAATGAGCCTCTCCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAGAAGGGTACCAACCAGGATGCCATGGTGGTTTGGGAGAACTTTTGTTCTAGACAGGATACTATTTTCTGTGGAGTTTTTGATGGCCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGAGATTCTCTTCCTCTTAAACTGAATGCCCATTGGGAAGTTAATGTTCCTGGTGAGGAAGTCCTCAAGGAGATTAGCGGTAATGCTGCAGGAAGCATGAATATAGAAGAGGCTGCCTCTGCATCTGTTGATGCTGAAGAAACAGAAAAACACCCTGAAATCTTTCAGACACTCAAGGAATCCTTTTTGACGGCATTCAAAGTTATGGATAGGGAACTGAAGACCCACCAAAGTATTGATTGTTTTTGTAGCGGAACAACAGCAGTAACTCTGATTAAGCAGGGCCTTGATCTTATCGTTGGAAATGTTGGTGACTCTAGAGCTGTGTTGGGTACAAGAGAGAATGATGATTCTCTTGTCGCTGTCCAGTTAACTGTGGATCTGAAACCCAATCTTCCAGCCGAAGAAGAGAGAATTCGCAAATGTAAAGGCCGTGTTTTTGCTCTTCAGGATGAACCCGAAGTAGCTCGTGTCTGGTTGCCGAACAATGACTCGCCAGGCCTTGCCATGGCCAGGGCATTTGGTGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCAGAGATGTCATACAGAAGACTCACCGAAAAAGACGAGTTCATTGTCTTAGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATAGTGGCGGCCACATCAAGGCGTGCCTCAGCTGCTCGAGCCCTGGTCGAGTCAGCAGTTCGCGCATGGAGGTACAAGTATCCAACCTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTTTTGGACTCTGCCTCACACAAAGTATGCAGTGCTTCCATTGCCAAGTCCAAGGAGCAACCTGGTTCGACCGTCCAAGTCCACAATGGCGACAGGGGAGACGTTTCGGCCCCGACCGGGCTGGGAAGGTCAGGAACATGCAGGGAGAACGATGAAGGCGATGACAGCAACAAGAATGAGGAGGAGAAAGAGTGTAGGGAAGAGGAAATAGATCCTGAGTCAGAAATAGAATGGTCTGCTCTTGAAGGAGTGTCTCGTGTGAACACATTGCTAAACCTGCCAAGGTTTGAACCTGACAAAGAAGACAAGGGGATGAGAAAACAAAATTGA 1443 0.4775 MGSCFSAESRSPRPTSPSTSFRKRKSNAKKRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEVNVPGEEVLKEISGNAAGSMNIEEAASASVDAEETEKHPEIFQTLKESFLTAFKVMDRELKTHQSIDCFCSGTTAVTLIKQGLDLIVGNVGDSRAVLGTRENDDSLVAVQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEMSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAATSRRASAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSASHKVCSASIAKSKEQPGSTVQVHNGDRGDVSAPTGLGRSGTCRENDEGDDSNKNEEEKECREEEIDPESEIEWSALEGVSRVNTLLNLPRFEPDKEDKGMRKQN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00522 480 PANTHER PROTEIN PHOSPHATASE 34 371 IPR015655 GO:0004722|GO:0006470
Vian2g00522 480 MobiDBLite consensus disorder prediction 418 436 - -
Vian2g00522 480 MobiDBLite consensus disorder prediction 390 449 - -
Vian2g00522 480 Gene3D - 57 376 IPR036457 -
Vian2g00522 480 MobiDBLite consensus disorder prediction 1 22 - -
Vian2g00522 480 MobiDBLite consensus disorder prediction 1 32 - -
Vian2g00522 480 ProSiteProfiles PPM-type phosphatase domain profile. 62 373 IPR001932 -
Vian2g00522 480 Pfam Protein phosphatase 2C 88 352 IPR001932 -
Vian2g00522 480 SUPERFAMILY PP2C-like 54 374 IPR036457 -
Vian2g00522 480 CDD PP2Cc 61 373 IPR001932 -
Vian2g00522 480 FunFam probable protein phosphatase 2C 33 57 376 - -
Vian2g00522 480 SMART PP2C_4 53 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00522 Vian-Chr2 6293150 6296292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00522 1 471 PP2C-type Phosphatase Gene Family AT3G02750 62.949 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00522 - - gmx:100790373 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00522 2 6293150 6296292 Vian2g00522 2 6293150 6296292 ECH