Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00462 ATGCTGGAAGAGGAAGAAGCAGCAGATATTGGCAAAAACCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAACATGAACTGCATACTACCCGCTCATGGGAATTTCTTGGACTACAGAGAAATGGTAAGAACTCTGCATGGCAGAAGGGAAGCTTTGGTGAAAATACAATAATTGCAAACATCGACACTGGTGTTTGGCCAGAGTCCGAGAGCTTCAGTGATAAAGGATATGGTCCTGTTCCCTCCAAATGGCGTGGGGGTAATGTTTGTCAGATTAACAAACTTCCACGCTCTAAGGCAAATCTATGCAACAGAAAGCTGATAGGAGCAAGATTCTTCAACAAAGCTTTCCAGGCTTACAATGGCGAACTTGTTCCATCGCTGCAAACAGCGCGTGATTTCATGGGGCACGGGACCCACACTCTATCAACCGCTGGGGGCAATTTCGTCCGAGGCGCAAGCGTATTTGCGGTGGGCAACGGCACCGCAAAGGGTGGGTCCCCTAGAGCACGAGTTGCAGCGTACAAAGTGTGTTGGTCTCTGACGGACCCTGCCGGTTGTTACGGCGCCGACGTGTTGGCTGCTATCGACCAAGCCATCGATGACGGCGTTGATGTCATCAATCTTTCAGTTGGTGGCAGTTACGTGGTGACCCCCGAAGGAATATTCACCGACGAAGTTTCCATCGGAGCCTTCCATGCCATTTCTAGAAATATCGTGGTAGTTGCCTCTGCCGGAAATAATGGACCAACACCTGGCTCTGTGGTCAATGTGGCTCCTTGGGTCTTCACCATCGCTGCTAGCACCATAGACAGAGATTTCAGCAGCAATTTAACCATTAACAACAATCAGCAAATCGAGGGAGCGAGTCTTTTTGTAAACTTGCCACCGAATCAGGCCTTTTCTCTGATCCTGTCCACAGATGCTAAACTTGCCAATGCAACATTTCGAGACGCTCAACTGTGTAGGCGTGGAACACTTGATCCTGCAAAAGTAAAGGGCAAAATAGTGCGTTGTATTCGAGATGGAAAGATAAAATCAGTTGCTGAGGGTAATGAAGCTCTTTCTTCAGGCGCACAGGGAATGATTTTGGGCAATCAAAAGCAAAATGGAAAAACAACTTTTGGCGAGCCTCATGTTCTCTCCACTGTGGGAACAAATGATGACCATGCAGGAGGACAGTCTGATTTTTTCTTAACTGCAACGGACCCTATAGAATCAGGTGCTACCATAAGAATGTCCCCAGCAAGGACGTTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTCGAGGACCCAATAAGATTCAACCATCAATACTCAAGCCCGATGTGACTGCACCTGGTGTGAACATACTTGCTGCCTACTCAGAATTCGCAAGTGCATCAACCTTGCTAACAGACAAACGTCGTGGGTTTAAATTCAATGTATTGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATCGCTGGACTTCTCAAAACACGTTATCCTAGTTGGAGTCCTGCTGCTATAAAATCAGCAATCATGACCACAGCAACCACACGAGACAACATAAACAGGCCAATACAGGATGCGTTTGCTAAAACACTGGCAACTCCCTTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCCATAGATCCCGGCCTCGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCTGGATACGACCAACAACTCATTTCTGCTCTCAATTTCAATAGAACTTTCATTTGTTCAGGCACTCACAGTGTGACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAAGCCGTAACCATTACTCGCACGGTAACGAATGTTGGAACACCAAGCACATACACTGCAACTGCCCAACTACCTGGATATAACATTGCCGTCGTGCCAAATTCCTTGACTTTCAATAAAATTGGTGAAAAGAAGACGTTCAAGGTGACTGTGCACGCAAGCAGTGTAACTAAGCGGAGAACTTATCAATTTGGAGAATTGCGATGGACAGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAGCGCAGATGA 2094 0.4618 MLEEEEAADIGKNPNVVSVFLSKKHELHTTRSWEFLGLQRNGKNSAWQKGSFGENTIIANIDTGVWPESESFSDKGYGPVPSKWRGGNVCQINKLPRSKANLCNRKLIGARFFNKAFQAYNGELVPSLQTARDFMGHGTHTLSTAGGNFVRGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPAGCYGADVLAAIDQAIDDGVDVINLSVGGSYVVTPEGIFTDEVSIGAFHAISRNIVVVASAGNNGPTPGSVVNVAPWVFTIAASTIDRDFSSNLTINNNQQIEGASLFVNLPPNQAFSLILSTDAKLANATFRDAQLCRRGTLDPAKVKGKIVRCIRDGKIKSVAEGNEALSSGAQGMILGNQKQNGKTTFGEPHVLSTVGTNDDHAGGQSDFFLTATDPIESGATIRMSPARTLFGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSEFASASTLLTDKRRGFKFNVLQGTSMSCPHVAGIAGLLKTRYPSWSPAAIKSAIMTTATTRDNINRPIQDAFAKTLATPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTFICSGTHSVTDLNYPSITLPNLGLKAVTITRTVTNVGTPSTYTATAQLPGYNIAVVPNSLTFNKIGEKKTFKVTVHASSVTKRRTYQFGELRWTDGKHIVRSPITVKRR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00462 697 CDD Peptidases_S8_3 25 519 IPR034197 -
Vian2g00462 697 ProSitePatterns Serine proteases, subtilase family, serine active site. 483 493 IPR023828 -
Vian2g00462 697 FunFam Subtilisin-like protease SBT1.5 55 283 - -
Vian2g00462 697 Gene3D Peptidase S8/S53 domain 56 566 IPR036852 GO:0004252|GO:0006508
Vian2g00462 697 ProSiteProfiles Serine proteases, subtilase domain profile. 32 553 - -
Vian2g00462 697 Pfam Fibronectin type-III domain 599 694 IPR041469 -
Vian2g00462 697 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 694 IPR045051 -
Vian2g00462 697 CDD PA_subtilisin_like 277 384 - -
Vian2g00462 697 Gene3D - 271 420 - -
Vian2g00462 697 Pfam Subtilase family 53 523 IPR000209 GO:0006508|GO:0008236
Vian2g00462 697 SUPERFAMILY Subtilisin-like 27 557 IPR036852 GO:0004252|GO:0006508
Vian2g00462 697 Gene3D - 570 696 - -
Vian2g00462 697 PRINTS Subtilisin serine protease family (S8) signature 53 72 IPR015500 -
Vian2g00462 697 PRINTS Subtilisin serine protease family (S8) signature 133 146 IPR015500 -
Vian2g00462 697 PRINTS Subtilisin serine protease family (S8) signature 482 498 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00462 Vian-Chr2 5516377 5521028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00462 2 695 Subtilisin-like Serine Gene Family AT2G04160 53.429 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00462 - - gmx:100813564 1169.07