Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00460 ATGGGCAGATCCATTTTTCTTCTTCAGCTTATACTTTCCTCATTTCTCCTTTTCACTTTCTTGCTGGAAGCTGTTCCTGGCAACAGAAAGTTATATATTGTATATTTGGGAGCTCATTCCCATGGTGCCAACCCCACTTCCGTTGATCTCCAAATTGCTACCGATTCTCATTATCATTTATTGGCTTCAGTCCTGGGGAGTGAAGAGAAAGCGAAAGAAGCAGTAATTTACTCATACAACAGACACATAAATGGGTTTGCAGCGATGCTGGAAGAGGAAGAAGCAGCAGATATTGCCAAAAAGCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAACATAAACTGCACACTACCCGTTCATGGGAATTTCTTGGACTACACAGAAATGGTAAGAACTCCGCATGGCAAAAGGGAAACTTTGGTGAAAATACAATAATCGCAAACATCGACACAGGTGTTTGGCCAGAGTCAGAGAGCTTCAGTGATGAAGGATATGGTCCCGTTCCCTCCAAATGGCGTGGGGGTAATGTCTGTCAATTTAACAGTTTTTTAAGCAACAAGACAAAACTATGCAACAGAAAGCTGATAGGGGCAAGATTCTTCAAAGAAGCTTACGAGGCATATAACGGTCCACTTGTTACCCAGCTGCAAACAGCGCGTGACCTCATGGGACATGGGACCCACACCTTATCAACAGCTGGGGGCAATTTCGTCCCAGGCGCCAGTGTATTTGCTGTGGGTAATGGCACCGCAAAGGGTGGGTCCCCGAGAGCACGAGTTGCAGCGTACAAAGTGTGTTGGGATCGGGCGGACCCATCCGGTTGTTACGGCGCGGATATGTTGTCTGCTTTCGACCAAGCCATCGACGACGGTGTCGATCTCATAAATCTTTCAGTTGGTGGATTTCACGACGTGAGCCCCGAAGGAATACTCACCGACGAGGTTTCCATTGGAGCCTTCCATGCGATTTCTAACAACATACTTTTAGTAGCCTCTGCAGGAAACGATGGACCAGCTTCTGGTTCTGTGGTAAACGTTGCACCTTGGGTCTTCACCATTGCTGCTAGCACCATAGACAGAGACTTTAGCAGCACTTTAACCATCAACAACAATAAACAAATCGAGGGAGCGAGTCTTTTTGTAGATTTGCCACCGAATCAGGCCTTTTCGCTGATCCTCTCCACCGATGCTAAACTCCCTACTGCTACGTTTCGGGATGCTCAACTGTGTAGAGCAGGAACACTGGATCCCAGAAAAGTGAATGGGAAAATAGTGTCATGCAGTCGCGAAAAGATAAAATCTGTTGCGGAGGGTCAGGAGGCTCTATCTGCAGGTGCAAAGGGAATGGTTGTGAGAAATCAACCGCAACAGGGAACTACACTTGAAGCTGAGCCCCATGTTTTCACTGCTGTGGGCGCATCTAACCCTCATCCCCACCCCAAACCAAAATTATTTACAAATCACACTGAATCTACAGAATTTCAAATAGCTGACACGGACCCTTTTAAATCAGGTGCTACCATAAAATTGTCTCCAGCAAGAACATTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGGGGACCCAATAAGATGCTGCCAGCAATTCTCAAGCCAGATGTGACTGCGCCTGGTGTGGACATACTTGCTGCCTACTCAGAATATGCAAGTGCATCAACCTTGCTAACAGACAAACGTCGTGGATTTAAATTCAACGTAATGCAAGGAACTTCCATGTCTTGCCCTCATGTTACTGGCATCGCTGGACTTATCAAAACACGTTATCCTAAATGGAGCCCTGCTGCTATAAAGTCAGCAATCATGACCACAGCAACCACACTTGACAACACTAAAAGAAAAATACATGACGGGTTTGTGAAAACAGTGGCAGATCCCTTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCCATAGATCCCGGCCTCGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGCGCTTCTGGATACAACCAACAACTCATTTCTGCTCTCAATTACCATAAAACTTTCATTTGTTCAGGCACTCACACTGTAACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTAGGCTTAAAAGCTGTAACCATTCCTCGCACAGTAACAAATGTTGGGCCACCAAGCACATACACAGCCAGCGTCCAATTGCTTGGATATAACATTACCGTTGTGCCAAGTTCCTTGACTTTCAGCAAAACTGGTGAAAAGAAGACATTCAAGGTTACTGTGCAGGCAAGCAGTAAAACAAAGCGGAGAACCTATGAATTTGGGGAATTGCGATGGACAGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAACGCAGATAA 2385 0.4524 MGRSIFLLQLILSSFLLFTFLLEAVPGNRKLYIVYLGAHSHGANPTSVDLQIATDSHYHLLASVLGSEEKAKEAVIYSYNRHINGFAAMLEEEEAADIAKKPNVVSVFLSKKHKLHTTRSWEFLGLHRNGKNSAWQKGNFGENTIIANIDTGVWPESESFSDEGYGPVPSKWRGGNVCQFNSFLSNKTKLCNRKLIGARFFKEAYEAYNGPLVTQLQTARDLMGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPRARVAAYKVCWDRADPSGCYGADMLSAFDQAIDDGVDLINLSVGGFHDVSPEGILTDEVSIGAFHAISNNILLVASAGNDGPASGSVVNVAPWVFTIAASTIDRDFSSTLTINNNKQIEGASLFVDLPPNQAFSLILSTDAKLPTATFRDAQLCRAGTLDPRKVNGKIVSCSREKIKSVAEGQEALSAGAKGMVVRNQPQQGTTLEAEPHVFTAVGASNPHPHPKPKLFTNHTESTEFQIADTDPFKSGATIKLSPARTLFGRKPAPVMASFSSRGPNKMLPAILKPDVTAPGVDILAAYSEYASASTLLTDKRRGFKFNVMQGTSMSCPHVTGIAGLIKTRYPKWSPAAIKSAIMTTATTLDNTKRKIHDGFVKTVADPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYNQQLISALNYHKTFICSGTHTVTDLNYPSITLPNLGLKAVTIPRTVTNVGPPSTYTASVQLLGYNITVVPSSLTFSKTGEKKTFKVTVQASSKTKRRTYEFGELRWTDGKHIVRSPITVKRR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00460 794 ProSiteProfiles Serine proteases, subtilase domain profile. 120 650 - -
Vian2g00460 794 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 791 IPR045051 -
Vian2g00460 794 Pfam Fibronectin type-III domain 696 791 IPR041469 -
Vian2g00460 794 Gene3D - 359 517 - -
Vian2g00460 794 FunFam Subtilisin-like protease SBT5.3 22 116 - -
Vian2g00460 794 CDD PA_subtilisin_like 365 471 - -
Vian2g00460 794 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Vian2g00460 794 Gene3D Peptidase S8/S53 domain 144 663 IPR036852 GO:0004252|GO:0006508
Vian2g00460 794 SUPERFAMILY Subtilisin-like 115 654 IPR036852 GO:0004252|GO:0006508
Vian2g00460 794 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Vian2g00460 794 PRINTS Subtilisin serine protease family (S8) signature 579 595 IPR015500 -
Vian2g00460 794 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vian2g00460 794 Pfam Subtilase family 141 627 IPR000209 GO:0006508|GO:0008236
Vian2g00460 794 FunFam Subtilisin-like protease SBT1.5 143 372 - -
Vian2g00460 794 ProSitePatterns Serine proteases, subtilase family, serine active site. 580 590 IPR023828 -
Vian2g00460 794 CDD Peptidases_S8_3 113 616 IPR034197 -
Vian2g00460 794 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Vian2g00460 794 Gene3D - 667 793 - -
Vian2g00460 794 Pfam PA domain 410 474 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00460 Vian-Chr2 5485322 5491166 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00460 32 792 Subtilisin-like Serine Gene Family AT2G04160 50.847 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00460 - - gmx:100813564 1185.24