Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g00449 | ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCTTTGCCTGTTCTGGTTGAGGTATCTAATGCGCACACTGCTGCAATGAGAGAAGCTGGTCAAAGACTAAATGCGCAGGATGTTTCGGGTGTGCGAGGGATTCCATCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCCATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCACGAATAGTTTTGGTTAGAGAGGATATGGGGTTCGATACACGGTCCTGTCAAGAGCCTCCCTCCCCTGTTCCTACAAGAACGTGGAAAGGAAAGAGCTCTTTACCTGAAGCCGTAGAACTTGTGCCTGATATTCAGACATTGAAGGGTAGCAATGATTCTTTTGGGGAAACTGGTCCAAGTTCGTTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTGCCAATAGGTCAAACCAAATCCGAGGCAGCATGTTTGATGAAGAGTGTGTCCTTGAAGGGTTCTGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAAGCATGGCTGTTGTTTCTCCTGCAGAAAGCCTGGTTGATGAGTCAAATGTGACGCATAACATACCCTCGCCACTTTCGGGTGCTCGTGCATCTCAGAATACCGAGAACTCTCCTACTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTTAGTCCCCTTAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATCGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTTAGAGGGGATTCACTGGAGAGTGCAAAAACTAGTGCTAGCCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATAACTGGCAGTGCCAACAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAGCACGGGACGGAATTCTTGGCATGAGTCACTTCAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTGTATCTCTCAGAGCTTAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTTGGAGTATGCTGCACGGTATAAAGCAGAAGAATTTGCTGCATTGAAGGTCTTCTCCAGGTTGTTCAATAGCATGCAGAGTCACTTCTCTTTGAAGTCTGAAACAATAGGAAGCTTTTATGCAGCAGAGGTTCTGCTGGCACTTGAATATCTTCACATGCTTGGAGTGGTGTACAGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATAAGAAATATTGACGGGGATCCCTCCAAACGAGCTGGTGGCGCATTCTGTGTGCAGCCGGCTTGTATCGAGCCTTCATCGGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTTTTTGCTCAGAAAAATAAGAAGTCACGGAGGCCTAAAGCAGATCCAGGCCTGCAATCCAGCACACTTCCTGAGCTTGTTGCAGAACCAACAACTGCTCGGTCCATGTCTTTTGTGGGCACTCACGAATACCTTGCTCCCGAAATCATCAAAGGAGAAGGTCATGGAAGTGCTGTAGATTGGTGGACATTTGGGATTTTCTTGCATGAACTATTATACGGTAAAACCCCTTTCAAAGGCTCAGGAAACCGCGCGACCCTTTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCGGAGTCACCGGCCACCAGTTATGCGAGCCGTGATCTCATCCGCTGCCTGCTGGTGAAGGAGCCGCAGCACCGGCTGGGAGTGAAGAGGGGTGCGACTGAGATCAAACAGCACCCGTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACTCCACCAGAAGTTCCAAGAGCAGTTGAATGTGATGTTGTAGCAGCAAAGTTTGAAGCAGTTGATAGTGTTGGGGTTGGCATGAACAATAGTAGTAAGAGGATGGGAGGTAATAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG | 2391 | 0.468 | MERVAEPKVLPRSLPVLVEVSNAHTAAMREAGQRLNAQDVSGVRGIPSREGNQFSKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVPTRTWKGKSSLPEAVELVPDIQTLKGSNDSFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAACLMKSVSLKGSGPFLEDLSICVPAKKQSMAVVSPAESLVDESNVTHNIPSPLSGARASQNTENSPTAPDSEEKECVWDASLPPSGNVSPLSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFLEYAARYKAEEFAALKVFSRLFNSMQSHFSLKSETIGSFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRRPKADPGLQSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRCLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAVECDVVAAKFEAVDSVGVGMNNSSKRMGGNNEMKSGGKYLDFEFF | 796 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g00449 | 796 | PANTHER | FLIPPASE KINASE 1-RELATED | 144 | 755 | - | - | |
Vian2g00449 | 796 | MobiDBLite | consensus disorder prediction | 296 | 345 | - | - | |
Vian2g00449 | 796 | FunFam | serine/threonine-protein kinase D6PK-like | 627 | 750 | - | - | |
Vian2g00449 | 796 | Pfam | Protein kinase domain | 369 | 550 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00449 | 796 | Pfam | Protein kinase domain | 629 | 732 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00449 | 796 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 521 | 533 | IPR008271 | GO:0004672|GO:0006468 | |
Vian2g00449 | 796 | FunFam | Serine/threonine-protein kinase D6PK-like | 366 | 451 | - | - | |
Vian2g00449 | 796 | Gene3D | Phosphorylase Kinase; domain 1 | 326 | 482 | - | - | |
Vian2g00449 | 796 | SMART | serkin_6 | 368 | 732 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00449 | 796 | FunFam | Serine/threonine-protein kinase OXI1 | 485 | 552 | - | - | |
Vian2g00449 | 796 | CDD | STKc_phototropin_like | 366 | 750 | - | - | |
Vian2g00449 | 796 | Gene3D | Transferase(Phosphotransferase) domain 1 | 486 | 548 | - | - | |
Vian2g00449 | 796 | SUPERFAMILY | Protein kinase-like (PK-like) | 350 | 750 | IPR011009 | - | |
Vian2g00449 | 796 | MobiDBLite | consensus disorder prediction | 296 | 341 | - | - | |
Vian2g00449 | 796 | ProSiteProfiles | Protein kinase domain profile. | 368 | 732 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00449 | 796 | MobiDBLite | consensus disorder prediction | 601 | 620 | - | - | |
Vian2g00449 | 796 | MobiDBLite | consensus disorder prediction | 208 | 262 | - | - | |
Vian2g00449 | 796 | MobiDBLite | consensus disorder prediction | 127 | 147 | - | - | |
Vian2g00449 | 796 | Gene3D | Transferase(Phosphotransferase) domain 1 | 627 | 750 | - | - | |
Vian2g00449 | 796 | MobiDBLite | consensus disorder prediction | 208 | 235 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g00449 | Vian-Chr2 | 5236252 | 5239336 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g00449 | 1 | 796 | AGC Kinase Gene Family | AT2G44830 | 63.415 | 0.0 | 920 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Vian2g00449 | Pkinase | 2.3e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g00449 | - | - | gmx:100800019 | 1358.58 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian9g01487 | 9 | 30957298 | 30960545 | Vian2g00449 | 2 | 5236252 | 5239336 | PCT |