Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00449 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCTTTGCCTGTTCTGGTTGAGGTATCTAATGCGCACACTGCTGCAATGAGAGAAGCTGGTCAAAGACTAAATGCGCAGGATGTTTCGGGTGTGCGAGGGATTCCATCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCCATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCACGAATAGTTTTGGTTAGAGAGGATATGGGGTTCGATACACGGTCCTGTCAAGAGCCTCCCTCCCCTGTTCCTACAAGAACGTGGAAAGGAAAGAGCTCTTTACCTGAAGCCGTAGAACTTGTGCCTGATATTCAGACATTGAAGGGTAGCAATGATTCTTTTGGGGAAACTGGTCCAAGTTCGTTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTGCCAATAGGTCAAACCAAATCCGAGGCAGCATGTTTGATGAAGAGTGTGTCCTTGAAGGGTTCTGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAAGCATGGCTGTTGTTTCTCCTGCAGAAAGCCTGGTTGATGAGTCAAATGTGACGCATAACATACCCTCGCCACTTTCGGGTGCTCGTGCATCTCAGAATACCGAGAACTCTCCTACTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTTAGTCCCCTTAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATCGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTTAGAGGGGATTCACTGGAGAGTGCAAAAACTAGTGCTAGCCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATAACTGGCAGTGCCAACAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAGCACGGGACGGAATTCTTGGCATGAGTCACTTCAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTGTATCTCTCAGAGCTTAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTTGGAGTATGCTGCACGGTATAAAGCAGAAGAATTTGCTGCATTGAAGGTCTTCTCCAGGTTGTTCAATAGCATGCAGAGTCACTTCTCTTTGAAGTCTGAAACAATAGGAAGCTTTTATGCAGCAGAGGTTCTGCTGGCACTTGAATATCTTCACATGCTTGGAGTGGTGTACAGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATAAGAAATATTGACGGGGATCCCTCCAAACGAGCTGGTGGCGCATTCTGTGTGCAGCCGGCTTGTATCGAGCCTTCATCGGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTTTTTGCTCAGAAAAATAAGAAGTCACGGAGGCCTAAAGCAGATCCAGGCCTGCAATCCAGCACACTTCCTGAGCTTGTTGCAGAACCAACAACTGCTCGGTCCATGTCTTTTGTGGGCACTCACGAATACCTTGCTCCCGAAATCATCAAAGGAGAAGGTCATGGAAGTGCTGTAGATTGGTGGACATTTGGGATTTTCTTGCATGAACTATTATACGGTAAAACCCCTTTCAAAGGCTCAGGAAACCGCGCGACCCTTTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCGGAGTCACCGGCCACCAGTTATGCGAGCCGTGATCTCATCCGCTGCCTGCTGGTGAAGGAGCCGCAGCACCGGCTGGGAGTGAAGAGGGGTGCGACTGAGATCAAACAGCACCCGTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACTCCACCAGAAGTTCCAAGAGCAGTTGAATGTGATGTTGTAGCAGCAAAGTTTGAAGCAGTTGATAGTGTTGGGGTTGGCATGAACAATAGTAGTAAGAGGATGGGAGGTAATAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2391 0.468 MERVAEPKVLPRSLPVLVEVSNAHTAAMREAGQRLNAQDVSGVRGIPSREGNQFSKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVPTRTWKGKSSLPEAVELVPDIQTLKGSNDSFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAACLMKSVSLKGSGPFLEDLSICVPAKKQSMAVVSPAESLVDESNVTHNIPSPLSGARASQNTENSPTAPDSEEKECVWDASLPPSGNVSPLSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFLEYAARYKAEEFAALKVFSRLFNSMQSHFSLKSETIGSFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRRPKADPGLQSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRCLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAVECDVVAAKFEAVDSVGVGMNNSSKRMGGNNEMKSGGKYLDFEFF 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00449 796 PANTHER FLIPPASE KINASE 1-RELATED 144 755 - -
Vian2g00449 796 MobiDBLite consensus disorder prediction 296 345 - -
Vian2g00449 796 FunFam serine/threonine-protein kinase D6PK-like 627 750 - -
Vian2g00449 796 Pfam Protein kinase domain 369 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00449 796 Pfam Protein kinase domain 629 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00449 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Vian2g00449 796 FunFam Serine/threonine-protein kinase D6PK-like 366 451 - -
Vian2g00449 796 Gene3D Phosphorylase Kinase; domain 1 326 482 - -
Vian2g00449 796 SMART serkin_6 368 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00449 796 FunFam Serine/threonine-protein kinase OXI1 485 552 - -
Vian2g00449 796 CDD STKc_phototropin_like 366 750 - -
Vian2g00449 796 Gene3D Transferase(Phosphotransferase) domain 1 486 548 - -
Vian2g00449 796 SUPERFAMILY Protein kinase-like (PK-like) 350 750 IPR011009 -
Vian2g00449 796 MobiDBLite consensus disorder prediction 296 341 - -
Vian2g00449 796 ProSiteProfiles Protein kinase domain profile. 368 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00449 796 MobiDBLite consensus disorder prediction 601 620 - -
Vian2g00449 796 MobiDBLite consensus disorder prediction 208 262 - -
Vian2g00449 796 MobiDBLite consensus disorder prediction 127 147 - -
Vian2g00449 796 Gene3D Transferase(Phosphotransferase) domain 1 627 750 - -
Vian2g00449 796 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00449 Vian-Chr2 5236252 5239336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00449 1 796 AGC Kinase Gene Family AT2G44830 63.415 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vian2g00449 Pkinase 2.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00449 - - gmx:100800019 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01487 9 30957298 30960545 Vian2g00449 2 5236252 5239336 PCT