Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00437 ATGGATCCCTTCAAAGGACAAGGAGGCATTCAGATGCTGCTAACCGCTGAACAAGAAGCACAACACATTATTTCTAATGCAAGAAATTTAAGAACCCAAAGGTTGAAGCAGGCAAAGGAAGAGGCTGAGAAAGAGGCTGCACAATACAGATCTCACATGGAAGATGAGTATCAAAATTCAATTTCAGAGACCACAGGGACTTCTGGATCTAATGTGAAAAGGCTTGAGGAGGAGACAGAGGCTAAGATTAAACATTTAAAGAAATCAACTTCAGATGTCTCATCAAAAGTGGTTGAAATGCTGCTCAAGTGTGTCACAAATATCAAAATATAA 333 0.3934 MDPFKGQGGIQMLLTAEQEAQHIISNARNLRTQRLKQAKEEAEKEAAQYRSHMEDEYQNSISETTGTSGSNVKRLEEETEAKIKHLKKSTSDVSSKVVEMLLKCVTNIKI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00437 110 Coils Coil 32 59 - -
Vian2g00437 110 MobiDBLite consensus disorder prediction 53 72 - -
Vian2g00437 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vian2g00437 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vian2g00437 110 MobiDBLite consensus disorder prediction 40 72 - -
Vian2g00437 110 Gene3D - 3 110 - -
Vian2g00437 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 57 IPR028987 -
Vian2g00437 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vian2g00437 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00437 Vian-Chr2 5080121 5080696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00437 8 108 Primary Pumps ATPases(2) AT4G23710 52.475 6.90e-31 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00437 K02152 - gmx:100818549 164.851