Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00434 ATGAGAATTGCTACTCCTTCTTCTTCCTCGTCTTCCTCAGGTTGTTCTCATTTCTGGTCGTCGGCGCGCCGATCGAAGCGCCTCGCGACGCCGGAGGAGAAGGCCTACCGCGACAGCACCGACCTCGGCCTCTCCCGCCGCCTCGGCGTCATCGACCTCGTACTCCTTGGAATTGGCGCATCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCCCGCGACGCCGGACCCGGAGTGACAATAAGTTTTATACTTGCGGGAGCATCGTGTGTTATAAATGCACTCTGTTATGCTGAACTAGCTTCTCGTTTTCCCGCTGTTGTGGGAGGAGCTTATCTATATACATACACAGCTTTTAATGAACTTACGGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCACATTGGAGCAGCGAGTATTGCCAGAAGCCTAGCAAGTTATCTGATAAATATTCTAGAACTCTTTCCTGTTTTCAAAGATAACATTCCAAATTGGATTGGACATGGTGAAAGCATTGGAGATGTGTTATCCATCAATATCTTGGCTCCTATTCTGCTAATACTTCTCACTTTAGTTCTATGTCTAGGTGTTCATGAATCGTCAATTGTGAATTGTATTATGACAGTGACCAAGGTAATCATTGTTATCATTGTCATTTTTGCTGGAGCATTTGAGGTCGATGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTAAAATCTATATTTACAGGAGCTACAGTAGTCTTCTTTGCATATGTTGGTTTTGATGCAGTTGCCAATTCTGCCGAAGAATCTAAGAGGCCTCAGCGGGATTTGCCAATTGGCATAATAGGAAGCCTCTTAGTATGTATTGCATTGTACATTGGAGTATGCTTGGTTATTACTGGAATGGTTCCATACAATCTTCTAGGAGAAGATGCTCCTCTGGCTGAAGCTTTTACATCTAAGGGATTAAAATTTGTTTCTGTTCTGATTAGCATTGGTGCTGTTGCCGGACTTACAACAACACTCCTTGTTGGTCTCTATGTTCAGTCTCGGTTATATCTCGGGCTTGCCAGGGATGGCTTACTACCCTCGATATTTGCAAAGGTTCACTCCATACGCCACACCCCTATTCATTCTCAGATCTGGGTTGGCTTGGTTGCCAGTATTTTGGGTGGGCTGTTGGATGTGCGTGTGCTCTCTCACATTCTTTCCGTTGGTACACTGACTGGATATTCAGTTGTCTCAGCATGTGTTATTGTACTTCGCTGGAAGGATAAGAAAGGTAGTCAAGTGTCGTCTTCTGCTGAGCGGGAAGGTGTAATTTGCCTCATTGTCGTTGCTCTTTTTGGATTTGCTACTGGGCTCTTGTACCGTTATGATGCTTCATTTATTTTTCTGATTCTCACCATAGTTATCGCAGCCGGTGCTTCTGCTGCTCTTGTTTTCCGCCAGGTTTACGCAGATGCACCGGGGTTTTCCTGCCCAGGGGTTCCCATTCTGCCAAATATCTGCATATTTTTCAACATGTTCTTATTTGGCCAGTTGCACGAAGAGGCATGGGTGAGATTTGTCGTTCTTTGTATTGTCATGATTGGTGTTTATGCAATATATGGCCAGTATCATGCGAACCCCAGTGCAGAAGATAATATCTATATCGAGGCACCTGTGGAAGAAGATCCATGA 1683 0.4522 MRIATPSSSSSSSGCSHFWSSARRSKRLATPEEKAYRDSTDLGLSRRLGVIDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPNWIGHGESIGDVLSINILAPILLILLTLVLCLGVHESSIVNCIMTVTKVIIVIIVIFAGAFEVDVSNWSPFAPNGLKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLAEAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLARDGLLPSIFAKVHSIRHTPIHSQIWVGLVASILGGLLDVRVLSHILSVGTLTGYSVVSACVIVLRWKDKKGSQVSSSAEREGVICLIVVALFGFATGLLYRYDASFIFLILTIVIAAGASAALVFRQVYADAPGFSCPGVPILPNICIFFNMFLFGQLHEEAWVRFVVLCIVMIGVYAIYGQYHANPSAEDNIYIEAPVEEDP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00434 560 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 39 541 - -
Vian2g00434 560 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Vian2g00434 560 Gene3D Amino acid/polyamine transporter I 44 474 - -
Vian2g00434 560 Pfam Amino acid permease 48 452 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vian2g00434 560 Pfam C-terminus of AA_permease 492 541 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00434 Vian-Chr2 5049831 5054784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00434 10 485 Organic Solute Cotransporters AT1G05940 71.310 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00434 K03294 - gmx:100776671 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00434 2 5049831 5054784 Vian2g00434 2 5049831 5054784 ECH
Vian8g00008 8 114386 116110 Vian2g00434 2 5049831 5054784 PCT