Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00387 ATGAATGCACCCATGAGGGTTCCAATGGATACCGCCAACAGTCAACTAAACCATAACCTTAACATGCCCCTAATCCAAGACCAAGCACTACGCTGTCATGAACGCACCCAAAATCCTCAGACAGATTCTCCAAATGTTTATGCCACCACATCTTTCCTCGGCACTTGTCTCAATGGACTCAATGCTTTGTCAGCTATATCAGATTTCGTAAGAATGTCAGAAAAACTTTCGTACAATCCTTCCTTTAGGGTTCCTTTACTTCTCAATGATGAGGAGAAAGCCATTGCCTCTTCTGCCAAAAATACTGTATCCTTCTTTCGTACATGCCTTAATGGACTCAATACAATAGCAGGTGTTGGCATACTCTCGGTTCCTTATGCTCTTGCAACAGGAGGCTGGTTAAGCTTGGCTCTTCTGTTTTCTATTGCCGCTGCTGCATTTTACACGGGCCTTCTGATTAAAAGATGCATGGATAAGGACTCAAACATCAGAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGACTGATAGTGTCAATATCCATGTACACGGAACTATATCTGGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGTAACATATTCCCCATTGGAGAGGTTCACATAGCAGGCTTAGCAATTGGTGGGAAGCAATTATTTGTGATTATGGTTGCCCTTATCATCTTGCCCACGGTTTGGTTGGACAACTTGAATCTACTCTCTTATGTATCTGCAAGTGGAGTCTTCGCTTCTGTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGCGCTCATCCTGTCTTTCCCACACTGTACAATTCGATGACAAACAAACATCAGTTCTCTAACGTCCTACTTGTATGTTTTCTCCTAACCACCGTGGGTTATGCATCCATGGCTATAGTGGGTTATTTAATGTTTGGTGACGGGGCTGAATCTCAAGTAACATTGAACCTGCCTCTGGACAAACTCAGCTCAAAATTAGCAATATACACAACCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTGAAAGATTTGCTTCCAAAGACGTACAAGAATAGGGTGACGAGCATCTTACTGAGCACAGTGTTGGTATTGAGCACCACCGTTGTTGCCCTTGCTGTCCCTTTCTTTGGGTCTCTCATGTCGCTGGTTGGAGCCTTTCTGAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCGGGCACTTACAGGAAATTTGGGTGTGAGACGGTATGTTTTATCGTCAACATGGAGGCCGAGGTTGGAGACCAAGGAAAAAGAACCATAAAACATCTATGGGCCAACTACATGGAGGTGGAATTTTTACGACAAAAACATAGCGTAGATACTCGAGAGAGTTGTATCCTATTTGATCACCATTGGGGTGAGGAAGTGGAACGTAGAGGAGATTTTCATGAAGTTTGTGAATCTCTATGA 1593 0.4275 MNAPMRVPMDTANSQLNHNLNMPLIQDQALRCHERTQNPQTDSPNVYATTSFLGTCLNGLNALSAISDFVRMSEKLSYNPSFRVPLLLNDEEKAIASSAKNTVSFFRTCLNGLNTIAGVGILSVPYALATGGWLSLALLFSIAAAAFYTGLLIKRCMDKDSNIRTYPDIGELAFGKTGRLIVSISMYTELYLVSIGFLILEGDNLSNIFPIGEVHIAGLAIGGKQLFVIMVALIILPTVWLDNLNLLSYVSASGVFASVLIILSITWTATFDGVGFHHKGTLVHWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIVGYLMFGDGAESQVTLNLPLDKLSSKLAIYTTLVNPISKFALMATPITNALKDLLPKTYKNRVTSILLSTVLVLSTTVVALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGCETVCFIVNMEAEVGDQGKRTIKHLWANYMEVEFLRQKHSVDTRESCILFDHHWGEEVERRGDFHEVCESL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00387 530 PANTHER OS05G0424000 PROTEIN-RELATED 111 457 - -
Vian2g00387 530 Pfam Transmembrane amino acid transporter protein 102 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00387 Vian-Chr2 4340960 4350614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00387 88 477 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.524 1.06e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00387 K15015 - gmx:100794374 648.277