LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian2g00384	ATGTCAGAAAAACATTCCAACAATTCATCCGTGAATGTGCCTTTAGTAGCCGATAATGGCGAGTTGGCTCAGCATAAAACCATAACCTATCCTCCTTCTGCACAAGACACTGTATCCTTCTTTCACACTTGTCTGAACGGACTCAATGCAATAGCAGGTGTAGGTATACTCTCAGTTCCTTACGCTCTTGCATCTGGAGGATGGTTAAGCTTGGTTCTTTTGTTTGGAATTGCCACTGCAGCACTTTACACGGGCACGTTGATAAAAAGATGCATGGTTATGAATACGAATATCAGAAGCTATCCTGATATAGTTTGGTTGGACAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTCGCTTCTGTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCGTTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGTGCACATCCTGTCTTTCCCACCTTGTACAATTCCATAAGAAACAAACATCATTTCACTAATGTCTTAACTGGCTGCTTTCTCTTAACCACTGTGGGCTATGCATCCATGGCTATAGTGGGTTATTTAATGTTTGGTGAGGAGGTTGAGTCACAAGTAACACTGAACCTGCCTCTGAACAAAGTTAGCTCAAAAGTAGCAATATACACAACGTTGATGAATCCCATATCGAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTAAAAGACTTGCTTCCAAGGAGGTACAAGAATAGGGTGACGAGCATCTTAGTTAGCACAGTGTTGGTAATGAGCACCACCATTGCTGCCCTTGCTGTTCCTTTCTTTGGGTCTCTGATGTCACTGGTTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCGGGCACTTACAGGAACTTTGGGTGTGAGAGTGTAGTCATAGTGATACTAATAATGGCAGCTTTAGCAATGGCAATATCTGGGACATACACCTCTTTCATGGAAATAGCACACCACCTAGTTCAACTATGA	1083	0.422	MSEKHSNNSSVNVPLVADNGELAQHKTITYPPSAQDTVSFFHTCLNGLNAIAGVGILSVPYALASGGWLSLVLLFGIATAALYTGTLIKRCMVMNTNIRSYPDIVWLDNLSLLSYVSASGVFASVLIILSITWTATFDGVGFHHKGTLVRWNGLPTAVSLYAFCYCAHPVFPTLYNSIRNKHHFTNVLTGCFLLTTVGYASMAIVGYLMFGEEVESQVTLNLPLNKVSSKVAIYTTLMNPISKFALMATPITNALKDLLPRRYKNRVTSILVSTVLVMSTTIAALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRNFGCESVVIVILIMAALAMAISGTYTSFMEIAHHLVQL	360

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian2g00384	360	Pfam	Transmembrane amino acid transporter protein	37	104	IPR013057	-
	Vian2g00384	360	Pfam	Transmembrane amino acid transporter protein	107	349	IPR013057	-
	Vian2g00384	360	PANTHER	OS05G0424000 PROTEIN-RELATED	46	105	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian2g00384	Vian-Chr2	4302764	4304209	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian2g00384	105	353	Amino Acid or Auxin Permease AAAP Family	AT3G28960	56.000	7.82e-102	305

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian2g00384	K15015		-	gmx:100794374	457.603