Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00368 ATGGAGAACGTTTACAAACCAAGTAAGGAAAATCAGAAGCTTAACTTGCCAACTGGTTTTAGATTTCATCCAACTGATGAGGAGCTCATAAAATGCTACCTCACAAAGAAGGTTGCTGACAACTGTTTCTGTGCTGTGGCCATTGCTGAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAGAGTCCTTCTGGGAGGAGATTGCACGTTAGGAGGTTGAATTCCTCTGGAAACGAATCATCATCACCTTCTTCTCTGTTGCCTCCTCTGATGGATTCTCCTCCTAACAACAGTGAAACAAGAACCACTGCTGGTGAGTTGTCTCAGGTGATCAGCCGTGATCCAAATCATACTGTGGATAAGAAGAACACACATGATGACATTGTTGAAAGCATGGAAACTCCTATTCTGAACTTGTCATCCTCTGCAACACCTTTTGCTGTTTACCCTTTTGGAAAACCAACCCTTTCGGTCGCAGACCAACCAGCCCAGATTGCAAACCAAATTGGGAACTCACAGTACCCAGATTATTGTTATATGCCTCAAGATCAGTCCTTGAAGATGCTGATGACTGGAAACCATGAACCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGATGGAAGAGAGTTTGATGCTGATATAGAAACAATGCTTGAGAATCAAGAAATTCATGAGCTTGTGCAGGGCATGTGGGCACCGATTGCATGTGGAATTACTGAAGAAGGTTAA 735 0.434 MENVYKPSKENQKLNLPTGFRFHPTDEELIKCYLTKKVADNCFCAVAIAESEWVVCRVFEKSPSGRRLHVRRLNSSGNESSSPSSLLPPLMDSPPNNSETRTTAGELSQVISRDPNHTVDKKNTHDDIVESMETPILNLSSSATPFAVYPFGKPTLSVADQPAQIANQIGNSQYPDYCYMPQDQSLKMLMTGNHEPSAKQIQKAEFSDGREFDADIETMLENQEIHELVQGMWAPIACGITEEG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00368 244 SUPERFAMILY NAC domain 12 48 IPR036093 GO:0003677|GO:0006355
Vian2g00368 244 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 50 - -
Vian2g00368 244 MobiDBLite consensus disorder prediction 71 106 - -
Vian2g00368 244 Pfam No apical meristem (NAM) protein 17 50 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00368 Vian-Chr2 4114236 4115482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00368 14 56 NAC Transcription Factor Family AT5G18270 55.814 4.44e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian2g00368 NAM 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00368 - - gmx:100790888 188.348