Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00355 ATGTATGCAATGCAGCCATCTCCGGATTTAGAAATGGATGTACCAGCTGGCCGAGGTGGTGCTGGCCTCAACATGTTTCTACCAAATTATAAATTGGGAAAAACTCTTGGCATTGGATCTTTTGGCAAGGTGAAAATTGCAAAACATGTATTGACTGGTCATAAGGTTGCAATCAAGATCCTAAATCGATGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAAATTAGAACTTGAAGTTTTAAAATTGCTCAGTCATCCTCGCATTATAAAACTTCATGAGGTGATAGAAACTCCAACTGACATATGTGTTGTTATGGAGTATGCTTGTAGAGAGCTTTTTGATTACGTAATAGAAAAAGGAAGGTTAGAAGAAGACGAAGCTCGTAATATTTTTCAGCAGATAATCTCAGGACTGGAGTATTGTCACAATAAGATGGTGGTTCATAGAGATCTGAAACCTGAAAACATACTTTTGGACTTCAATTGTGATGTAAAGATAACTGGTTTTGGCTGGAGCAACATCATGCATGCTGGTTATTTTCATAAGACAAGTTGTGGAAGCACTAACTATGCAGCTCCTGAGGTTATATGTGGAAAATTATATATTGGACCCGAAGTTGATGTATGGAGTTGTGGTGTAGTTCTGTATTTTATTCTTTGTGGATTTCTACCTTTTGACGATGAAAACATTCCAAATCTCTTCAACAAAATAAAGGGAGGGATATTCACTCTTCCATGTTACCTATCTCCCGGAGCTAGAGATTTGATATCAAAGATGCTTGATGTGGAACCTATGAAAAGGATAACAGTATCTGAGATCCAACAACACCCATGGTTGCAACTTCAACTTCAACCTAACACAATAGATACAATGTAA 882 0.3719 MYAMQPSPDLEMDVPAGRGGAGLNMFLPNYKLGKTLGIGSFGKVKIAKHVLTGHKVAIKILNRCKIKNMEMEEKVKLELEVLKLLSHPRIIKLHEVIETPTDICVVMEYACRELFDYVIEKGRLEEDEARNIFQQIISGLEYCHNKMVVHRDLKPENILLDFNCDVKITGFGWSNIMHAGYFHKTSCGSTNYAAPEVICGKLYIGPEVDVWSCGVVLYFILCGFLPFDDENIPNLFNKIKGGIFTLPCYLSPGARDLISKMLDVEPMKRITVSEIQQHPWLQLQLQPNTIDTM 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00355 293 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Vian2g00355 293 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 28 283 - -
Vian2g00355 293 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Vian2g00355 293 Pfam Protein kinase domain 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00355 293 SMART serkin_6 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00355 293 ProSiteProfiles Protein kinase domain profile. 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00355 293 FunFam Non-specific serine/threonine protein kinase 21 111 - -
Vian2g00355 293 FunFam Maternal embryonic leucine zipper kinase 22 289 - -
Vian2g00355 293 PIRSF STPK_Pim-1 10 293 IPR017348 GO:0004674|GO:0006468|GO:0043066
Vian2g00355 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Vian2g00355 293 Gene3D Transferase(Phosphotransferase) domain 1 22 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00355 Vian-Chr2 4009936 4013761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00355 30 287 CBL-interacting serine-threonine protein kinases AT2G26980 45.627 2.80e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Vian2g00355 Pkinase 2.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00355 K07198 - gmx:100796687 421.009