Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00321 ATGGCTGTAGAGGAGTCTGAGTCTGCGATTGGAGAGCTAGAAAGAGAGGAGAACTTGATTGCTGCAGTAAGGCATATTGTGAAGGCACTAGGGCCGAATAAGACCCTTACCAGTGATGCCAAGAAAATTCTGGCAGATCTTGGGACCAGATTGTCTTCCATGTCCGTACCTAGTGAGAAGGAGGAGGGAAAACAAGGCCAAGGAGGGGAGGGCGGCAATGATCATGATGGTGGTGCTGATGATGATGATGATGAGGAGGAGGAGGATGATGAGGGTCTTAATGCTATTGAAGAAAGACTTAATGTGATTCAGGAGAAAATTATGAGATGGGAGGAGGATCAGTCCATGATTTGGGATTTGGGAACTGAAGAAGCGTCTGAGTATCTGAATGCTGCTAACGAGGCCCGCAGGTTGATTGAGAAGTTGGAAAGCTTGCATTTGAGGAAAGAGGATCAGGAGTACGAGTTTCTGCAGAGGGCTTATAGTGTTCTTCAAACTGCTATGGCACGCCTTGAAGAAGAATTCAGTAACTTGCTTATCCAGAACAGGCAACCTTTTGAGCCTGAATATGTCTCTTTTCGTTCCAGTGAGGAAGATGTTGTTGATGAGAACTCCATAATCTCTATAGGTGATGAATCGGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCGTCTGAGGAGCATATCATTGATTTGGTTCATCCAGCCGTGATCCCGGATCTCAGGTGTATTGCAAACTTACTTTTTGCTTCAAATTATTGCCAGGAATGTTCCAATGCTTATATCATTGTCCGGAGGGATGCCCTAGACGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATCGAGGACGTTCTGAAAATGCAATGGGGTACTCTGAATTCCAAAATCAAAAGATGGATTTGGGCTGTCAAGATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTCAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTCAGTCTATCTTGTTTTGTTGATGCATCTAAGGCTTCGATATTGCAGCTTCTGAATTTCGGTGAAGCCATGTCCATTGGCCCTCACCAACCTGAGAAATTGTTCCGTGTTCTTGACATGTACGAGGTTCTGCAAGACCTTATGCCAGACATTGATGCTTTGTACACAGATGAGGTTGGTTCCTCGGTTAAAATTGAATGTCATGAAGTTCTGAAGAGACTAGGCGATTGTGTGAGGGCAACATTTTTTGAATTTGAAAATGCCATTGCAACAAATGCATCATCAACCCCTTTTGTTGGTGGTGGGATACATCCTTTAACCAAATATGTTATGAATTATCTCAGAACCCTTACAGACTACACTGACATACTCAATCTACTTCTGAAGGACCAGGAAGAGGAAGAATCCATTTCGCTGTCACCTGACATGAGCCCTGGTACAGAAGAAGATAGCAGAAGCCATGGGTCTCCATGTAGAGTTTCCTCAATGGCCCTTCACTTCCGATCACTCGCATCTATCTTGGAAAGCAACCTTGAGGAGAAGTCTAAGTTATACAAAGAAGTCTCCTTGCAGCACTTGTTCTTGATGAACAACCTGCATTACATGGCTGAAAAGGTCAAGGGGTCTGAACTCAGGCTGGTGTTTGGAGATGAATGGATTCGAAAGCGCAATTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGGGCTAGTTGGAGTTCCATTCTTCTCTTACTAAAGGATGAAGGGATTCTTGCTCCGGGTACAAATTCGGTCTCAAAAAGTCTTCTTAAAGAGAGGCTACGAAGCTTCTACCTTGGTTTTGAGGATGTTTACAGGATCCAGACAGCTTGGCTTATCCCAGATATTCAGCTTCGCGAAGATTTACGGATTTCTATATCTCTCAAAGTAATCCAAGCTTATAGAACTTTTGTTGGAAGGCATAACAGTCACATAAGTGACAAAATCATTAAGTACAGTGCTGATGATTTAGAAAACTACCTTTTGGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCTCATAGAAGGTAG 2052 0.4352 MAVEESESAIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLGTRLSSMSVPSEKEEGKQGQGGEGGNDHDGGADDDDDEEEEDDEGLNAIEERLNVIQEKIMRWEEDQSMIWDLGTEEASEYLNAANEARRLIEKLESLHLRKEDQEYEFLQRAYSVLQTAMARLEEEFSNLLIQNRQPFEPEYVSFRSSEEDVVDENSIISIGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDLRCIANLLFASNYCQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMQWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSLSCFVDASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLQDLMPDIDALYTDEVGSSVKIECHEVLKRLGDCVRATFFEFENAIATNASSTPFVGGGIHPLTKYVMNYLRTLTDYTDILNLLLKDQEEEESISLSPDMSPGTEEDSRSHGSPCRVSSMALHFRSLASILESNLEEKSKLYKEVSLQHLFLMNNLHYMAEKVKGSELRLVFGDEWIRKRNWKFQQHAMKYERASWSSILLLLKDEGILAPGTNSVSKSLLKERLRSFYLGFEDVYRIQTAWLIPDIQLREDLRISISLKVIQAYRTFVGRHNSHISDKIIKYSADDLENYLLDFFEGSQKWLQNPHRR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00321 683 Pfam Exo70 exocyst complex subunit 301 667 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian2g00321 683 Coils Coil 93 113 - -
Vian2g00321 683 MobiDBLite consensus disorder prediction 76 94 - -
Vian2g00321 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 91 672 IPR004140 GO:0000145|GO:0006887
Vian2g00321 683 SUPERFAMILY Cullin repeat-like 114 671 IPR016159 -
Vian2g00321 683 Coils Coil 125 181 - -
Vian2g00321 683 Gene3D Exocyst complex component Exo70 107 678 - -
Vian2g00321 683 MobiDBLite consensus disorder prediction 49 94 - -
Vian2g00321 683 MobiDBLite consensus disorder prediction 467 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00321 Vian-Chr2 3626847 3628898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00321 12 683 EXO70 exocyst subunit family AT3G29400 47.965 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00321 K07195 - gmx:100799102 1198.34