Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00316 ATGGCACAAGTTCAAGACAGAGACAACACCCACAACAAACATCATTACATTTCTTCAGCACCCACAACAACAACACAATCTCCAATGAACAATTTGCCACGAGATCTGTTGAGAAGCTTCATGGGAGTGAATAATCATCACAGCCGCCATGGTAATCATCAGAATTTGCCTCTGCCGGTGGTGAAGTTGGAGGAAGAAGAGGAGTTGGAACTAAGTCTCGGGCTTTCTATGAACGGTCGATTTGGGGTGGACCCCACCGCCAAGAAGATAAAGAGAACGACGTCGATTCCGGAGTTCGTGAGGGACGAGGAGATGGGGTACGCTGCTGTGGGGTGCACGGGGCCTCTGGTGAGGACATGCTCGCTGCCGACGGAGACGGAGGAGGAGTGGCGGAAAAGGAAGGAGTTGCAGACGATGCGCCGCATGGAGGCTAGAAGGAAGCGCTCCGAGAAGCAGAGAAATTTGAAGGCTGTCAGAGAGCAACAACAACTAAGGGTTGGGTCTGAAGGGAATAATCCTGTGGAACAAGGTGCAGGGGCTTACGCTGAGGGTGCACCCCTGGGGAGAACCGTGTCGTTGACCACACGCGTTTGTGGACTCGGTTTGAATGGGGACATCGAGAAAGAGAAGAAGGAGAAGGGTGGAGTAGTGTTGGCGCCTCCATCGCCTTCGCAGGGTTCCATTGGTTCTTCGGGAACCTCAGAAGTTGAGTCTCAACAAGGTCAAGGGATTAAGTTAGGGAGGGTGAGACCTACTAGGGTCCCCCATAGTGGCATGATTGTCCTAGGACCAACACCAGTAGATGTTAGAAGTCCTACTAGTGCCAACTTGGTGCCAGAAGGTGATCTGAAATCACCAATGGCTGCCCAAGAAAGTGTTGCAGAGAACGGAACCAAGAATGCTGCTGCAGTGGATATGAGAAGTGAATCTAACAAGCATTCACTACCCCAAAACAGAACCAAAGACATTGTGAGGAACTTGTTGGAAGACATGCCCTGTGTCTCCACAAAAGGTGATGGTCCTACTGGAAGAAGAGTGGAAGGTTTTCTTTACCGGTATGGGAAAGGGGAAGAAGTGAGGATAGTGTGTGTTTGCCATGGCAGTTTTCTCACCCCTTCAGAGTTTGTTAAGCATGCTGGTGGCGGTGACGTGGCAAACCCATTGAAGCATATTGTTGTTAGTCCAAGCATTTTGTGA 1197 0.5046 MAQVQDRDNTHNKHHYISSAPTTTTQSPMNNLPRDLLRSFMGVNNHHSRHGNHQNLPLPVVKLEEEEELELSLGLSMNGRFGVDPTAKKIKRTTSIPEFVRDEEMGYAAVGCTGPLVRTCSLPTETEEEWRKRKELQTMRRMEARRKRSEKQRNLKAVREQQQLRVGSEGNNPVEQGAGAYAEGAPLGRTVSLTTRVCGLGLNGDIEKEKKEKGGVVLAPPSPSQGSIGSSGTSEVESQQGQGIKLGRVRPTRVPHSGMIVLGPTPVDVRSPTSANLVPEGDLKSPMAAQESVAENGTKNAAAVDMRSESNKHSLPQNRTKDIVRNLLEDMPCVSTKGDGPTGRRVEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANPLKHIVVSPSIL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00316 398 MobiDBLite consensus disorder prediction 212 243 - -
Vian2g00316 398 Pfam Tify domain binding domain 359 393 IPR032308 -
Vian2g00316 398 Coils Coil 132 161 - -
Vian2g00316 398 MobiDBLite consensus disorder prediction 223 241 - -
Vian2g00316 398 Pfam Ethylene-responsive binding factor-associated repression 64 98 IPR012463 -
Vian2g00316 398 MobiDBLite consensus disorder prediction 140 160 - -
Vian2g00316 398 PANTHER AFP HOMOLOG 2 33 396 IPR031307 GO:0007165
Vian2g00316 398 MobiDBLite consensus disorder prediction 1 33 - -
Vian2g00316 398 Pfam Putative nuclear localisation signal 116 172 IPR032310 -
Vian2g00316 398 MobiDBLite consensus disorder prediction 140 158 - -
Vian2g00316 398 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00316 Vian-Chr2 3566110 3568512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00316 - - vun:114185130 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00316 2 3566110 3568512 Vian2g00316 2 3566110 3568512 ECH