Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00312 ATGGCTTCAAATAATGTCCTAAAAGCGAGTGAGATCTTTGAAGGTCAAGTTCACTTGTACAAACACTTGTATGCTCATGCAATAGATTGTATGAGTATTAAATGGATGATTGAGCTTGGCATACCAGACATAATCCACAACCATGGTCAACCCATTTCACTTCCAAAGTTGGTTTCCATTCTACAAATTCCACCAAGTAAAGTTAGAGGCGTGAAGAGTCTCCTACGCTACCTGGCACACAATGGATTCCTTCAGATTCTAAGAGTCCACCACAGCACAGAAGAAAACGAAGCATATGCTCTAACACCTGCATCACACCTTCTTGTCAAAGGCACTGACTTTTGTCTTGCACCAATGGTAAAGGGTTTAACTGACCCAACTTTATCAGATATGTGGTCTCACTTGAAGAAGTGGACTTATGAGGATGATCTTACACTGGTTGATGTCTCCGTAGGATCAACTATGTGGGACTTTCTTGGTAAAAACCCAGCAATGAACGAGTCGTTCAATGAGGCAATGGCCAGTGATTCTCAGATGATGAACCTGGCATTAAAAGGTTGCAATTGGGTGTTCGAAGGAGTGGAGTCCATCGTGGATGTGGGAGGTGGAACCGGAACCACAGCCAAGGCTATCTGCGATGCATTTCCTAACGTGAAGTGCACTGTATTTGATCGCCCACAGGTTGTGGAGAAGTTGTCGGGAACCAACAATTTGACATATGTTGGCGGTGACATGTTCGAATCTATTCCCAAGGCTGATGCAGTTCTACTCAAGTGGATTCTGCATGATTGGAGTGACAAGGATTGTAAGAAGATATTAGAAAATTGCAGAGAAGCTATTTCTGGTAAAGGCAAAAGAGGAAAAGTAATTGTGATAGAAAATGTGATAAACGAAGGCAGAGATGAGCAGGGAGTTACTGGACTAAAGCTCATCATGGATGTTCACATGACATGTCTTATTAATGGAAAAGAAAGAAGAGAAGAAGAATGGAAGAAACTGTTCGTGGAAGCAGGGTTTCAAAGCTACAAAATATCTCCTTTCACAGGACATTTGTCTCTTATTCAGATCTATCCTTGA 1077 0.4197 MASNNVLKASEIFEGQVHLYKHLYAHAIDCMSIKWMIELGIPDIIHNHGQPISLPKLVSILQIPPSKVRGVKSLLRYLAHNGFLQILRVHHSTEENEAYALTPASHLLVKGTDFCLAPMVKGLTDPTLSDMWSHLKKWTYEDDLTLVDVSVGSTMWDFLGKNPAMNESFNEAMASDSQMMNLALKGCNWVFEGVESIVDVGGGTGTTAKAICDAFPNVKCTVFDRPQVVEKLSGTNNLTYVGGDMFESIPKADAVLLKWILHDWSDKDCKKILENCREAISGKGKRGKVIVIENVINEGRDEQGVTGLKLIMDVHMTCLINGKERREEEWKKLFVEAGFQSYKISPFTGHLSLIQIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00312 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Vian2g00312 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Vian2g00312 358 FunFam O-methyltransferase ZRP4 110 358 - -
Vian2g00312 358 CDD AdoMet_MTases 197 293 - -
Vian2g00312 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Vian2g00312 358 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Vian2g00312 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Vian2g00312 358 Gene3D - 2 108 IPR036388 -
Vian2g00312 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 354 IPR029063 -
Vian2g00312 358 PANTHER O-METHYLTRANSFERASE 19 343 IPR016461 GO:0008168
Vian2g00312 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Vian2g00312 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00312 Vian-Chr2 3495855 3497055 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00312 22 344 Monolignol Biosynthesis Gene Families AT5G54160 32.326 6.32e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00312 K22588 - gmx:100811609 530.406