Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00311 ATGGCTTCCCACAACCTCAAAATCCATGAACAGTGCACTGTTGCGCCTCCCTCTGCACCCCAAACATCCCTCCCTCTCGTATTTTTCGACCTGTTCTGGCTCAGGTTTCATCCTGTAGAACGCATCTTCTTCTATTCCCTCCCTGTAACCCATTCAAACCCATCCATTTTCTTCGCCCAAGTTGTTCCGAAGCTCAAAAATTCACTCTCTCACACCCTCCAACACTTTTCCCCTCTCGCCGGCAACGTCCTGTGGCCCCATGGTTCTTCAAACCCCGTCGTTCAGTACAACCCAGGCGACGCTGTTTCAGTGGTGCTTGCAGAATCCGAAGCCGACTTCGACCACGCGTTGGACAACGCACCTAAAGACGCATCAGATTCACGTTGTTTGGTGCCCCACTTGGAATCTTCGGATTCTCATGCCTCTGTTATGGCTCTCCAAATCACTCTGTTCCCTAATAGAGGGTTCGCCATAGGAATCACCACCCACCACGCCGTCCTTGACGGAAAATCTTCAACTCTTTTCATCAAAGCCTGGGCTTCTCTGTGCAAAACCAATGATGATTACTCTGAGTCATCACCATCATCAACACCATCCTTGACTCCAGAATTGGAGCCTTTCTTTGACAGGACAGTCATCAAAAGCCCAAGTGAGTTAGGGTTCGACTTAGCAATCGATTTGGTTGAGATGTTAACCAAATTGTTCCCAAGTGAAAACAGCGACGGAAGATGCTTGAAGCTTCTACCTTTCCCTCCAAGATTGGAAGATCATGTTCGAGGGACATTCGTGCTCACGGGAGCTGATTTGGAGAGAATAAAGAATAGGGTGCTGTCCAAGTGGGACACTGTAGACATAGTTGAAGCAGAATCAAACTTAAACTCAACGGTTTCTTCAAAACCAACCAAACTGTCAACTTTTGTTCTAACTTGCGCTTATACTTTTGTTTGCATTGCCAAGGCCTGGCACAGAGTTGAAAAGGAGAAAAATAAGTTTGCTAGTGGGTTTACTATGGATTGCAGGGCCAGGTTGGAGCCTCCAATTCCTGAAAACTACTTTGGGAACTGTGTGTGGGGGAGTATGGTGGATGCGAAGCCATCGGCATTTCTAGAGGAAGAAGGGTTGGTTATTATTGCGAAAAGTACTCATAGTAAAATAAAAGAGATGCTGGATAAGGGTGTTTTTCATGGGATAGGTAATGCGGCTCCTAGATATGCAGCTTTGGCAAAGGAGGGAGTTGAACTCTTTGGAATTGCAGGGTCTAACCGTTTTGGGGTTTATGAGTTTGATTTTGGTTGGGGAAAGCCTTCAAAGGTGGAGATAGTATCGGTGGATAGAGCCATAACAATTGGATTGGCAGAAAACAGAGATGAGAAAGTCGGTGTTGAAATTGGGATTGTTCTGAAGAGACCAGTGATGGAACTATTTGCCACTTTGTTTCGTGGAGGATTGTCAGATGAGTGA 1461 0.462 MASHNLKIHEQCTVAPPSAPQTSLPLVFFDLFWLRFHPVERIFFYSLPVTHSNPSIFFAQVVPKLKNSLSHTLQHFSPLAGNVLWPHGSSNPVVQYNPGDAVSVVLAESEADFDHALDNAPKDASDSRCLVPHLESSDSHASVMALQITLFPNRGFAIGITTHHAVLDGKSSTLFIKAWASLCKTNDDYSESSPSSTPSLTPELEPFFDRTVIKSPSELGFDLAIDLVEMLTKLFPSENSDGRCLKLLPFPPRLEDHVRGTFVLTGADLERIKNRVLSKWDTVDIVEAESNLNSTVSSKPTKLSTFVLTCAYTFVCIAKAWHRVEKEKNKFASGFTMDCRARLEPPIPENYFGNCVWGSMVDAKPSAFLEEEGLVIIAKSTHSKIKEMLDKGVFHGIGNAAPRYAALAKEGVELFGIAGSNRFGVYEFDFGWGKPSKVEIVSVDRAITIGLAENRDEKVGVEIGIVLKRPVMELFATLFRGGLSDE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00311 486 Pfam Transferase family 273 476 - -
Vian2g00311 486 Pfam Transferase family 18 203 - -
Vian2g00311 486 Gene3D - 6 232 IPR023213 -
Vian2g00311 486 Gene3D - 253 485 IPR023213 -
Vian2g00311 486 PANTHER - 6 485 - -
Vian2g00311 486 SUPERFAMILY CoA-dependent acyltransferases 299 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00311 Vian-Chr2 3461785 3463245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00311 6 435 Monolignol Biosynthesis Gene Families AT5G48930 25.734 8.93e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00311 - - gmx:100815354 702.975