Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00310 ATGGCTTCCCACAACCTCAAAATCCATGAACAGTGCACTGTTGCTCCTCCCTCTGCACCCCAAACATCCCTCCCTCTCGTATTCTTCGACCTGTTATGGCTCAGGTTTCATCCTATAGAACGCATCTTCTTCTATTCCCTTCCTGTAACCCATTCAAACCCATCCATCTTCTTCGCCCAAGTTGTTCCAAAGCTCAAAACTTCACTCTCTCACACCCTCCAACACTTTTCCCCTCTCGCCGGCAACGTCCTGTGGCCCAATGGCTCTTCCAACCCCGTCGTTCAGTACACCCCAGGCGACGCTGTTTCAGTGGTGCTTGCAGAATCCGAAGCCGACTTCGACCACGCGTTGGACAACGCACCTAAAGACGCATCAGAGTCACGTTTTTTGGTGCCTCACTTGGAATCCTCTGATTCTCATGCCTCTGTTATGGCTCTCCAAATCACTCTGTTCCCTAACAGAGGGTTCGCCATAGGAATCAGCACTCACCACGCCGTCCTCGACGGAAAATCTTCAACTATCTTCATCAAAGCTTGGGCTTCTCTGTGCAAAACCAATGATGATTACTCTGAGTCATCACCATCTTTGGCTCCAGAATTGGAGCCTTTCTTTGACAGAACAGTCATCAAAAGCCCGAGTGAGTTAGGGTTCAACGTATCACTCGATATTGCTGAGCTCGCAACCAAAAATATACCAGGTGAAAACAGCGACAGCAGATGCTTGAAGCTTCTACCTTTCCCTCCAAGATTGGAGGATGAGGTTCGAGGGACATTCGTGCTAACGGGAGCAGATTTGGAGAGATTAAAGAATAGGGTGCTGTCCAAGTGGGACAGTGTAGACATAGTTGAAGCAGAATCAAACTCAAACTCAAACTCAACGATTTGTTCAAAACAAACCAAAGTGTCGACTTTTGTTGTAACTTGCGCTTATGCTTTTGTTTGCATTGCCAAAGCCTGGAACGGAGTTGAAAAGGAGAAAAATAAGTTTGCTTGTGTGTTCACTGTGGATTGCAGGGCCAGGTTGGAGCCTCCAATTCCTGAAAACTACTTTGGGAACTGTGTATGGGGGAAGATGGTGGTTGATAAGCCATCGGCATTTATAGAGAAAGAAGGGTTTGTTATTATTGCGAAAAGTATTCATAGTAAAATAAAAGAGATATCAGATAAGGGTGTTTTTCATGAAGCAGATCAAGTTGCTTCTCGATATGCAGCTATGGCAGAACAGGGAGTTCAGATGTTAGGAACTGCGGGGTCTAACCGTTTTGGGGTTTATGAGAATGATTTTGGTTGGGGAAAGCCTTCAAAGGTGGAGATAGCATCGGTGGATAGAGCCATAACAATTGGATTGGCAGAGAACAGAGATGAGAAAGTCGGTGTTGAAGTTGGGATTGTTCTGAAGAGACCAGTGATGGAACTATTTGCCACTTTGTTTCGTGGAGGATTGTCAGATGAGTGA 1455 0.4598 MASHNLKIHEQCTVAPPSAPQTSLPLVFFDLLWLRFHPIERIFFYSLPVTHSNPSIFFAQVVPKLKTSLSHTLQHFSPLAGNVLWPNGSSNPVVQYTPGDAVSVVLAESEADFDHALDNAPKDASESRFLVPHLESSDSHASVMALQITLFPNRGFAIGISTHHAVLDGKSSTIFIKAWASLCKTNDDYSESSPSLAPELEPFFDRTVIKSPSELGFNVSLDIAELATKNIPGENSDSRCLKLLPFPPRLEDEVRGTFVLTGADLERLKNRVLSKWDSVDIVEAESNSNSNSTICSKQTKVSTFVVTCAYAFVCIAKAWNGVEKEKNKFACVFTVDCRARLEPPIPENYFGNCVWGKMVVDKPSAFIEKEGFVIIAKSIHSKIKEISDKGVFHEADQVASRYAAMAEQGVQMLGTAGSNRFGVYENDFGWGKPSKVEIASVDRAITIGLAENRDEKVGVEVGIVLKRPVMELFATLFRGGLSDE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00310 484 Gene3D - 6 230 IPR023213 -
Vian2g00310 484 Gene3D - 249 483 IPR023213 -
Vian2g00310 484 Pfam Transferase family 18 474 - -
Vian2g00310 484 SUPERFAMILY CoA-dependent acyltransferases 296 441 - -
Vian2g00310 484 PANTHER - 6 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00310 Vian-Chr2 3452345 3453799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00310 6 433 Monolignol Biosynthesis Gene Families AT5G48930 24.027 2.84e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00310 - - gmx:100815354 681.019