Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00307 ATGCATGTGCTACAAGTTTTCAGTATAGCACCAACTTTGGAATCAGAAGAATTACCAACTCAAACATCGCTTCCCCTCACCTTCTTTGACATACTGTGGTTAAGGTCACCTCCTATTCAACGCATCCTCTTCTACCAATTCTCTCACCCTACCCCACCCTTCTTCCATACCCTTCTTCCCAAACTCATACACTCTCTTTCTCTTACACTCGGCCACTTTTTTCCTCTTGCAGGCCACCTCACTTGGCCCCTTCACTCCCAAAACCCCATCATCAATTACAAAACAGGTGACTCTGTTTCTCTCACAGCAGCTGAATCTGATGCAGATTTCAACCATCTAGCCGGCTCAAATCTTTGGAAAACTGAAGAAATGCACCATCTTTTACCTCACTTGAACATATCACATGAACAGGCTACGCTTTTAGCCTTGCAAATCACTCTGTTTCCAAACTCTGGATTTTCCATTGGAATAACCTCACACCGTGCTGTTCTTGATGCCAAGACTTCAACATCGTTTATCAAGTCCTGGGCTTATCTTTGTAGAGAATCACGCGCACCCCCTTGTTTGCCACCTGAACTATGTCCTTTCTATGAAAGGATACTAGTAAAAGACCCTGACCAAATAGGGGAGAAGTTCCTCAATGATTGGTTAATGCAGGGAGGATCCAACAAAAGAAGCCTCATGGTTCGGGATGTGCAATCTCCGGAACATGCAACTGGAGGCTTATTTAAATTGTCTGGTTCAGATATTGAAAGGCTGAAGCATTTTGTTGTGTCTAAACAGAGACAGAACAACATCAACATTCATTTGTCAACGTTTGTGTTGTCTCTTGCCTATGCATGGGTTTGCAGGGTGAGAGCCGAGGAAATGAAAAACGAGAGAGTTACGTTGATTCTGACTGTGGATTGCAGGGGTTGTTTGGAGCCACCTCTTCCTCCGACCTATTTTGGTAACTGTGTTGGATTAAGACTTGCAATTGCTGAAAGAAGAGAATTGTTGGGGGAGGATGGACTAATTGTGGCTGTGGAAGCACTGAGTGAAGCTATGGAAAGTGTGAAGAAGGAGGGTGTTCTGATTGGAGCTGAAAATTGGTCATCATGGTTGCTTGATTGTGTGGGAGGTGAAGCTGATGTGAAGGCGATTGGAGTTGCAGGCTCACCGAATTTTGAGGCTTACAGCAGTGACTTTGGCTGGGGAGGACCAAAGAAGGTGGAGACAGTGTCTATTGAAAGAACTGCAGTGTTTAGTCTTTCAGATAGCAACAATGGAGAAGGAATTGAGATAGGTTTTGTGTCCAAGAAAACAACAATGGAGACCTTTGCTTCTCTTTTTGCTAAAGGACTTCAATCTTGA 1353 0.4405 MHVLQVFSIAPTLESEELPTQTSLPLTFFDILWLRSPPIQRILFYQFSHPTPPFFHTLLPKLIHSLSLTLGHFFPLAGHLTWPLHSQNPIINYKTGDSVSLTAAESDADFNHLAGSNLWKTEEMHHLLPHLNISHEQATLLALQITLFPNSGFSIGITSHRAVLDAKTSTSFIKSWAYLCRESRAPPCLPPELCPFYERILVKDPDQIGEKFLNDWLMQGGSNKRSLMVRDVQSPEHATGGLFKLSGSDIERLKHFVVSKQRQNNINIHLSTFVLSLAYAWVCRVRAEEMKNERVTLILTVDCRGCLEPPLPPTYFGNCVGLRLAIAERRELLGEDGLIVAVEALSEAMESVKKEGVLIGAENWSSWLLDCVGGEADVKAIGVAGSPNFEAYSSDFGWGGPKKVETVSIERTAVFSLSDSNNGEGIEIGFVSKKTTMETFASLFAKGLQS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00307 450 Pfam Transferase family 15 442 - -
Vian2g00307 450 Gene3D - 235 450 IPR023213 -
Vian2g00307 450 PANTHER - 3 449 - -
Vian2g00307 450 Gene3D - 2 228 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00307 Vian-Chr2 3354505 3355857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00307 65 440 Monolignol Biosynthesis Gene Families AT5G48930 22.922 5.74e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00307 - - vun:114186114 816.224