Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00302 ATGTCTGGGAAGTCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGCTCTTTGACCGCCACCGTTTCCTCACGGGCCAACGCTCCGGCACCTGCATTCAGCACAGACCAACTTCAGGTGCAAGCAGTTACGAAATTAAAGAGCTCAACGGTACAACGCTGAAAACTAAGGCAAAGAATCTGAAGGATGCTAGAGAAAAGCAACAATTCTCCACAGAATCATCCATAAATTCTTTATCTTCATCCTCTTGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACCATTCAGATGCAATCATCATCAAGAAATCAGACAAGAATTCCTGAAAATACAAATTCAAAGGTAGCAAAGAAGCAACTTGATACCTCGCGCCATCAATCCCTCCATTTCAATCATATTGTCAAAGACTCGATGCATAAAGAAGCTCAAGGATTGTCTGTGAGAACTGTGGCTGAAGAGGAAAAGAAGGGTCACACTAATACCTTGAAACTCATAGACTCTCCCCGGCCTCTGCGGTCACAAAAATCTGTCTATGCAGGAGTGACAGTTGCCGGCGAACCATTCCATACTCTTGCCAAGTCCAAGAAAACACCTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAAGCATAAGGAATTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGGTCCAATGAAGGAAACAAGTCTCGCAACCTGTTGAAGGGTCAGCAGAAGGGTTATGCAAAGAGCTCTAGCACAATGATTAACCAACTCCAAGAACCAGAAACTTCCAAAAGATCTTCCAGTGTTGTAGCAAAGTTGATGGGACTTGAAGCCCTACCGGAGCGTACACAAACTTGTGGGAGTCCGATTGGAACTTCTAGTTGCTCTAGCACAAGTGATGAAGATAAGCACCACCCAAAATTCACCTTGCCTCGGTTTAGAAAGGCTGATTCAATCACAAATGAAAAGCCTTATTCACGATTTGCACTAGAATCAAATCCTTGGAGGCAACCTGATGCAATCCAATGTTCTCAATTACAAGCTTCCAAAGATTGTGAATCTGATGTAAAAGCCTCAAAGACCTCTCTCACGGTATATGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACACATTCTTGAAGCAATGCAGAGACGTAAAGATTCGTTAGACATTGCTAGAGACCAGGCTTCAAATTCTCCATCTGACAATAAGAACAGTACTAATTCCAATGAAAACTCGAACATACAAAGCCCACGAGTACGACAGAAAGACCTGGCATCTGTCACGGTTGAGATGTCAAATTCTAACCGGGGTAGTAAATTGCCAATTGTCATCATGAAACCTGCGAAAGTTACTAGAAAAGTCAATAGTCCTTCTCCTACAGAATTATCAGTTCATGGAAAATCTGGTGTCAGCAAATGTTCCCTTAGTAATCCAAGAAATGGAAGATTAATTGACAAACGTAGTGCTAAAGGCATAAGTTCAACAAAAAATATCAAGGGTACTTTTGGCCAACAGGTTCGTCCATCATATAAAAACTTGAGAACTTCAAAATTGATGCAATCCTTGGAAGTTTCTCAAGACAAAAATGAAGAATGCACCACCAATTCTGGTTATATAACTGTGACTGGGAGCCCCAGATTACAAAAGAAGTTTGGTCTGGAGAGGTGTTCACGACCAACCAGTTCATCGTCGGATTCCTGCATTAACACAAGAGAGCACAATAGGCAACCTGTGGAATTGTCTTCTCCAAGTACAACACCAACACATAAGTTCTCCAGTTTACAGCAAATAAATGAACGTTTCAGTGAGATCAGTAGTAACTGGAGGAATTTTAAGCACCATGTTAATGTCATTTCGGACTTAGACGACAAAAGAAACTCGATCGGTCATAGTGAGATTGAAGTCATTCGAATTGATCAAACTGGAAAGATCATCAGTTCCTCCATCCAGCTGAGTTCTATGCATCAATATAATGCATTTGAAGAGTTGATGAAGGCTGAGACAATGGTTACTGTGGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTCTATAGAGATGACCCACCATCTCCAGTGAAAAAGAAACCAGACATCTCAAAATATTTAGGTGAAGCTCAAAGCACTGATGGTGATAGTGAAGAGAACTCAGTGGATATACTTCAAGAAATTGACTGGATTGAAGAGAAATTCATCAATTTCAATTACACTAAGCACCCTGACCATAAGTATATAACAGATATACTGTTAGCATCAGGTCTGCTCAGTGGCCACAGCTCCAGCCAGATATTTCACTCGCCGGGTCACTTGATTAATCCAAAGTTGTTCTTTGCACTTGAAAAAGTGAAGACAGAGAAGAGACATTTTAACATTGAAGCCAATGCAAAAAAGATTGCCAGGTTAAAAAATCCTGAGCAGATGCAAAGAAAACTCATATTTGATGTTGTCAATGACATTCTAGTTCAAAAGCTGATATTGGATAGTTCTTCAGCATTGTGGTGCAAACCAAGTGATTTTGCAGGCACAAGACCAAAAGGGCAGCAGCTTTTGGATGAGCTGTGCACAGAAATAGAGCAGTTGCAGCCTCAAAATGGGAATGTCAGTTTAGCTCATGAGGATGAAAATTTGAAGCATCACCATGCAATTTGGACTAACTGCTGCACTGAGATACCAAATGTTGTGTTGGATATTGAACGTTTGATCTTTAAGGATTTGATAACCGAGGTTGTGAGAGGTGAAGTAGCAAACCACACTGGCACACATTGCAGGAAACTAGTGTTTTTCAAGTAG 2880 0.4125 MSGKSLKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSGTCIQHRPTSGASSYEIKELNGTTLKTKAKNLKDAREKQQFSTESSINSLSSSSCSSSMSSLEFNRTIQMQSSSRNQTRIPENTNSKVAKKQLDTSRHQSLHFNHIVKDSMHKEAQGLSVRTVAEEEKKGHTNTLKLIDSPRPLRSQKSVYAGVTVAGEPFHTLAKSKKTPWDSPRLSYDETFKSATKHKEFPRLSLDSREGSNEGNKSRNLLKGQQKGYAKSSSTMINQLQEPETSKRSSSVVAKLMGLEALPERTQTCGSPIGTSSCSSTSDEDKHHPKFTLPRFRKADSITNEKPYSRFALESNPWRQPDAIQCSQLQASKDCESDVKASKTSLTVYGEIEKRVAELEFKKSGKDLRALKHILEAMQRRKDSLDIARDQASNSPSDNKNSTNSNENSNIQSPRVRQKDLASVTVEMSNSNRGSKLPIVIMKPAKVTRKVNSPSPTELSVHGKSGVSKCSLSNPRNGRLIDKRSAKGISSTKNIKGTFGQQVRPSYKNLRTSKLMQSLEVSQDKNEECTTNSGYITVTGSPRLQKKFGLERCSRPTSSSSDSCINTREHNRQPVELSSPSTTPTHKFSSLQQINERFSEISSNWRNFKHHVNVISDLDDKRNSIGHSEIEVIRIDQTGKIISSSIQLSSMHQYNAFEELMKAETMVTVEQPSPVSVLDAAFYRDDPPSPVKKKPDISKYLGEAQSTDGDSEENSVDILQEIDWIEEKFINFNYTKHPDHKYITDILLASGLLSGHSSSQIFHSPGHLINPKLFFALEKVKTEKRHFNIEANAKKIARLKNPEQMQRKLIFDVVNDILVQKLILDSSSALWCKPSDFAGTRPKGQQLLDELCTEIEQLQPQNGNVSLAHEDENLKHHHAIWTNCCTEIPNVVLDIERLIFKDLITEVVRGEVANHTGTHCRKLVFFK 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00302 959 MobiDBLite consensus disorder prediction 249 283 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 585 619 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 482 507 - -
Vian2g00302 959 PANTHER LONGIFOLIA PROTEIN 1 957 IPR033334 GO:0051513
Vian2g00302 959 Pfam Domain of unknown function (DUF4378) 771 938 IPR025486 -
Vian2g00302 959 Coils Coil 407 427 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 298 322 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 231 248 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 421 461 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 231 283 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 482 511 - -
Vian2g00302 959 MobiDBLite consensus disorder prediction 420 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00302 Vian-Chr2 3317648 3322257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00302 1 945 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.312 1.60e-83 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00302 - - vun:114182931 1647.87