Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00299 ATGGGACAATGTTTGAGCTTCTGCTGCTTTAAGCACACAGCTTCGTCTCAGCGACAGTATCCAACTGTGATAGAAGAGCTTTGCCCTCAATTTTCTCTAGCCGATCTTAAGAAATCGACAAACAACTTTGATGAAAAGCAAATAATTGGAAGTGGAAGCCTTGGCATTGTATATAAAGGCTCTCTCCGAAACAGTTGTGTTACTGAGTGTACAGTTGCAATCAAGCGAATATATGGGATCACTGAGAAGGAACTTAAGCAGTTCAAGAACGAAATTGAGTTGCTCTGCCAGTTTCGCCATCCAAATTTGGTCACTCTATTAGGATTTTGTGACCACAGAGACGAGAAGAATATTGTATATGAGTACATGACCAATGGATCTCTCCGTGATGTCCTATATTGTAGTGATATGAAAAAGAAGCCACTAACATGGAAGCAGAGGCTAAACATCTGCATAGGAGTAGCGAAGGCACTACACTACCTTCACACAGGTCTCAAGAGAACAATCTTTCATCGTGACATAACACCGTATAAAATTCTTTTGGATAGCAACATGGAGGCAAAACTCTCAGACTTCCGACTTTCCCTAACAGGACCACATTATGCATCAAAGCCACCACCAAAGATAATAACAAAAGATGGCTTTACAGGTACATATGGTTACGTGGCTCCTGAGATTTCACAAAGCAATACATTAACAGAAAAAAGCGATATTTACTCCTTCGGTGTAGTTATACTAGAAGTGGTATGCAAAGACAAGCTAAAAAGTGTTGAGAAGACGCAGAAACACCCTGTTGAGGAGTATATTGATCCAAATATTAAAGGAAAGATTGCACCAGAGAGTTGGGAAGTATTTATAGACATCACAGAAAGATGCTTGAACTTTGATCCAAACGAGCGACCATCAATGGGTGAAGTGGAGATTCAACTTGAGCTTTCTCTGTCACTGCAGGAAGAAGCAGATGTAAGAAATACTTGTGATGATTATAACCTATCATCTCTGACCATTATTAATTAG 1017 0.3982 MGQCLSFCCFKHTASSQRQYPTVIEELCPQFSLADLKKSTNNFDEKQIIGSGSLGIVYKGSLRNSCVTECTVAIKRIYGITEKELKQFKNEIELLCQFRHPNLVTLLGFCDHRDEKNIVYEYMTNGSLRDVLYCSDMKKKPLTWKQRLNICIGVAKALHYLHTGLKRTIFHRDITPYKILLDSNMEAKLSDFRLSLTGPHYASKPPPKIITKDGFTGTYGYVAPEISQSNTLTEKSDIYSFGVVILEVVCKDKLKSVEKTQKHPVEEYIDPNIKGKIAPESWEVFIDITERCLNFDPNERPSMGEVEIQLELSLSLQEEADVRNTCDDYNLSSLTIIN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00299 338 Pfam Protein tyrosine and serine/threonine kinase 46 307 IPR001245 GO:0004672|GO:0006468
Vian2g00299 338 FunFam Receptor-like protein kinase ANXUR2 8 122 - -
Vian2g00299 338 ProSiteProfiles Protein kinase domain profile. 43 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00299 338 Gene3D Phosphorylase Kinase; domain 1 6 122 - -
Vian2g00299 338 SUPERFAMILY Protein kinase-like (PK-like) 18 307 IPR011009 -
Vian2g00299 338 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Vian2g00299 338 PANTHER OS07G0166700 PROTEIN 28 317 IPR045272 GO:0004714|GO:0006468
Vian2g00299 338 FunFam Receptor-like protein kinase ANXUR2 123 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00299 Vian-Chr2 3276196 3277293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00299 30 328 Receptor kinase-like Gene Family AT2G39360 42.675 2.42e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00299 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00299 - - gmx:100779112 533.102