Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00292 ATGGAAACAAGTAACAAACCAATAACCATCCTTCTCCTACTGTTGTTGAGTTTCTTTCATCTTTCCAAAGCAGATGTTATTTTTGATCCCCCTGACCTACTCACCATCAACTGTGGCTCTTCTACCAACTTCTCCACGCCCGACGGTCGGAACTGGATTGGAGACACCAACACAAAGCTTCTCTCTGTAAGTCGGGGCTCAGTTCTTGCAACTGCACTCACACAATCAACCATACTGGGTCCTTACACCTCTGCTCGCCTCTCCTTCTCCAATTTCACTTACTCAATCTTCAATCTCACCGCTGGCCCAATGTTCCTTCGCCTCTTCTTCTTCTCAACTTCATACCAAAACAACTTTAATCGTTCCAAAGCCGTTTTCTCAGTCAAAGCAGGCCCATACACTCTCTTTCAACGTTTCAATGTTTCCCTCGATGCGGATTCTGTTAATGACCCTGCTCGCTCCAACATCCTATTCAGAGAGTATTGCATCAATCTCCATGAACGACAAAACCTCAACATAACCTTCATTCCAAGCTCCACAGGTTCCTACGCTTTCATCAACGGAATCGAGATTGTTTCAATGCCCTCTTATCTCTACTACACCGATCCTAACGTCGACATCCATGGATTGCCGAAACTTGTTGGAGGAGGAACATATCCAATTGAAACCATTTTGGCTCTGGAAACAAAGTACCGGCTAAGACTGGGGGACCGAAATATCCCCGCCGCAGAGGATACGGGTATGCTCAGAACGTGGGATGTCCATGATGAATATATAAGTAATCCAGGTGTAGAATCTCTAGATATCGACAATACAACCAAGCTGAACTTTAGTATGACTCCTAATTACACTGCACCAGACCAGGTATACCGTTCATTAGCGAGTATGGGACATAACGAATCTGTGAACATGGGGTTCAACCTCACATGGCAGCTTCCTGTTGATCCTGGTTTCACCTACGTGCTACGGTTACACTTTTGCCAGCTTAACCCGATGGTTATTGGGTCTGGTGACCAGATCTTCCTCATCTTCATTCAGGATCATTTGGTTGAAGACATGGTAGACATTTTCAATTGGGGCGATAAACAGAAGGGTGTACCAGTGGTTAGAGACTACGTAGTCATCATTCGAGATAATCAGAAAAAGGCAAATCTTTCTGTGAAATTACACCCTCACGATAAAAGCATGATCAAGGACGCACAACTAAACGCAATTGAGCTTTTCAAAATCAGCGACACAACAGGTAATCTCGCTGTGCCGAACCCAGACCCTCGTATACAAGCCACGGAGATTTCCCATGAAAACTCAAGCAAGAAAAGAAGAGGCACCACAAAAACCCTGGCCGCCGTTGTAGTTGCAGTTTCTGGTGTCGTTTTACTCTCCTCTATCATTGCTTTCTTTATCATCAAACTCAAGAAAAACGTTGCTTACAACAACGGTTCCAATAAAAAAGACGGAACTTCTCGCGGGGGAGGGTCGTCATCACTACCAACCGACCTCTGCCGTCACTTCACAATTGCAGAAATCGTGGAAGCTACCAACAACTTCGACGAAGTCTTTGTCGTTGGAGTGGGAGGATTTGGCAACGTGTACAAAGGCTACATCGGGGATTCTACGCCTGTGGCAATCAAAAGGCTCAAACCCGGTTCTCAGCAAGGTCTGAACGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGTCATCTTCATCTTGTTTCCCTCATCGGTTACTGCTACGAGAGCAACGAGATGATCCTCGTTTACGATTTCATGGATCGTGGAACCCTCCGTGACCATCTCTACGGAACCGATAACCCTCCACTCTCATGGAAGCAAAGGCTTCAAATATGCATTGGTGCCGCACGAGGACTCCATTATCTGCATACAGGTACGAAACAGATGATCATTCACCGTGACGTGAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTTGGGTTATCTCGAATTGGACCCACGGGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAGGGCAGTGTTGGGTATTTAGATCCGGACTATTACAAACGACAACGTTTGACGGAGAAGTCAGACGTGTACTCGTATGGGGTGGTGCTCTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTTCGAATGGTTGAGAGGCAACAGGCGTCACTTGTGGATTGGGCGAAGCATCGGTATGAGAAGGGGTTTCTGGGTGAGATTGTGGATCCAGCACTGAAGGACCAGATAGCACCTCACTGTTTGCGCAAATTTGGTGAGGTTGCATTGAGCTGTTTGCATGAGGATGGGACTCAGCGACCATCCATGAATGACGTCGTTGGTGTGTTGGAGTTTGTTATGCAACTTCAGCTTCAGGATGGTGCTAATGTCAATGCCGTCTCGGAAAGTGGTGAGGATTATGAAAACAGCACTACTGAGGACATGTTTAGCAGTAGCCATAGTAGTGTGAATGTTTCTGACTACAGTAACAGCAGTGGATTGAACACTACAAGCTACGCCAGTAAAGAATCTGAGAGGCTCTTAGAGCCTGTTTTCTCCGAGATTAAGGATCCAAAGGGACGATGA 2598 0.4627 METSNKPITILLLLLLSFFHLSKADVIFDPPDLLTINCGSSTNFSTPDGRNWIGDTNTKLLSVSRGSVLATALTQSTILGPYTSARLSFSNFTYSIFNLTAGPMFLRLFFFSTSYQNNFNRSKAVFSVKAGPYTLFQRFNVSLDADSVNDPARSNILFREYCINLHERQNLNITFIPSSTGSYAFINGIEIVSMPSYLYYTDPNVDIHGLPKLVGGGTYPIETILALETKYRLRLGDRNIPAAEDTGMLRTWDVHDEYISNPGVESLDIDNTTKLNFSMTPNYTAPDQVYRSLASMGHNESVNMGFNLTWQLPVDPGFTYVLRLHFCQLNPMVIGSGDQIFLIFIQDHLVEDMVDIFNWGDKQKGVPVVRDYVVIIRDNQKKANLSVKLHPHDKSMIKDAQLNAIELFKISDTTGNLAVPNPDPRIQATEISHENSSKKRRGTTKTLAAVVVAVSGVVLLSSIIAFFIIKLKKNVAYNNGSNKKDGTSRGGGSSSLPTDLCRHFTIAEIVEATNNFDEVFVVGVGGFGNVYKGYIGDSTPVAIKRLKPGSQQGLNEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYGTDNPPLSWKQRLQICIGAARGLHYLHTGTKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPDYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVERQQASLVDWAKHRYEKGFLGEIVDPALKDQIAPHCLRKFGEVALSCLHEDGTQRPSMNDVVGVLEFVMQLQLQDGANVNAVSESGEDYENSTTEDMFSSSHSSVNVSDYSNSSGLNTTSYASKESERLLEPVFSEIKDPKGR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00292 865 FunFam receptor-like protein kinase FERONIA 479 591 - -
Vian2g00292 865 Pfam Protein tyrosine and serine/threonine kinase 522 785 IPR001245 GO:0004672|GO:0006468
Vian2g00292 865 MobiDBLite consensus disorder prediction 805 847 - -
Vian2g00292 865 CDD STKc_IRAK 529 788 - -
Vian2g00292 865 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Vian2g00292 865 MobiDBLite consensus disorder prediction 419 439 - -
Vian2g00292 865 SMART serkin_6 516 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00292 865 PANTHER OS03G0124300 PROTEIN-RELATED 8 473 IPR046957 GO:0004672
Vian2g00292 865 ProSiteProfiles Protein kinase domain profile. 516 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00292 865 Gene3D Transferase(Phosphotransferase) domain 1 592 809 - -
Vian2g00292 865 Gene3D Phosphorylase Kinase; domain 1 481 591 - -
Vian2g00292 865 FunFam FERONIA receptor-like kinase 33 195 - -
Vian2g00292 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Vian2g00292 865 MobiDBLite consensus disorder prediction 805 848 - -
Vian2g00292 865 Pfam Malectin-like domain 36 410 IPR024788 -
Vian2g00292 865 Gene3D - 33 195 - -
Vian2g00292 865 Gene3D - 226 411 - -
Vian2g00292 865 FunFam FERONIA receptor-like kinase 225 411 - -
Vian2g00292 865 SUPERFAMILY Protein kinase-like (PK-like) 493 790 IPR011009 -
Vian2g00292 865 FunFam Receptor-like protein kinase FERONIA 592 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00292 Vian-Chr2 3128215 3130812 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00292 21 865 Receptor kinase-like Gene Family AT3G51550 44.332 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00292 Malectin_like 9.7e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00292 - - vun:114186088 1184.09